RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 KCNK13Q9HB14 408 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 MMP25Q9NPA2 562 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 OLAHQ9NV23 265 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 TXNDC16Q9P2K2 825 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 NAV2Q8IVL1 2488 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 URADA6NGE7 173 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 MAN1A2O60476 641 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 STMN1P16949 149 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 MAGEA4P43358 317 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 KCNC1P48547 511 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 ST13P50502 369 aaKnown RBP16.91■□□□□ 0.3
HMGN1-219ENST00000491183 TDGF1P3P51864 188 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 OR4D2P58180 307 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 SKP1P63208 163 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 CAV1Q03135 178 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 SRSF11Q05519 484 aaKnown RBP16.91■□□□□ 0.3
HMGN1-219ENST00000491183 SLBPQ14493 270 aaKnown RBP eCLIP16.91■□□□□ 0.3
HMGN1-219ENST00000491183 KBTBD12Q3ZCT8 623 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 TMIGD1Q6UXZ0 262 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 ZNF572Q7Z3I7 529 aaPredicted RBP16.91■□□□□ 0.3
HMGN1-219ENST00000491183 CRLF3Q8IUI8 442 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 CTAGE3PQ8IX95 158 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.91■□□□□ 0.3
HMGN1-219ENST00000491183 BEST3Q8N1M1 668 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 C5orf34Q96MH7 638 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 PHACTR1Q9C0D0 580 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 RAB17Q9H0T7 212 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 COPG2Q9UBF2 871 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 TEKT2Q9UIF3 430 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 OSGIN2Q9Y236 505 aa16.91■□□□□ 0.3
HMGN1-219ENST00000491183 MAST4O15021 2626 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 PRAMEF2O60811 474 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 CLDN1O95832 211 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 TBX6O95947 436 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-219ENST00000491183 JAK1P23458 1154 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 HSPA7P48741 367 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 SLC26A5P58743 744 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 RAB10P61026 200 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 ATP6V0D1P61421 351 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 GUCY2DQ02846 1103 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 INAQ16352 499 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 C4orf17Q53FE4 359 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 CDKL4Q5MAI5 379 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 GRTP1Q5TC63 336 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 QSOX2Q6ZRP7 698 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 CCDC25Q86WR0 208 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 CA13Q8N1Q1 262 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 PPM1NQ8N819 430 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 FBF1Q8TES7 1133 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 PTCHD1Q96NR3 888 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 RHBGQ9H310 441 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 NT5DC2Q9H857 520 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 NECTIN3Q9NQS3 549 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 GPRC5BQ9NZH0 403 aa16.9■□□□□ 0.3
HMGN1-219ENST00000491183 PTBP2Q9UKA9 531 aaKnown RBP16.9■□□□□ 0.3
HMGN1-219ENST00000491183 ZNF490Q9ULM2 529 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-219ENST00000491183 LRIT2A6NDA9 550 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 PRMT3O60678 531 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 RNH1P13489 461 aaKnown RBP16.89■□□□□ 0.29
HMGN1-219ENST00000491183 MAOAP21397 527 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 HNRNPH1P31943 449 aaKnown RBP16.89■□□□□ 0.29
HMGN1-219ENST00000491183 SPRP35270 261 aaPredicted RBP16.89■□□□□ 0.29
HMGN1-219ENST00000491183 BTN3A2P78410 334 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 SLC7A5Q01650 507 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 DLG1Q12959 904 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 RUNX2Q13950 521 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 MEP1AQ16819 746 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 SULT1C3Q6IMI6 304 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 ADNP2Q6IQ32 1131 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 VN1R5Q7Z5H4 357 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 TCAIMQ8N3R3 496 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 PDPRQ8NCN5 879 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 ELP5Q8TE02 316 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 NR4A3Q92570 626 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 KIAA1191Q96A73 305 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 MS4A6EQ96DS6 147 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 SIGLEC12Q96PQ1 595 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 CAPS2Q9BXY5 557 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 DNAJC11Q9NVH1 559 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 WWOXQ9NZC7 414 aa16.89■□□□□ 0.29
HMGN1-219ENST00000491183 IGKV3D-11A0A0A0MRZ8 115 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 A0A0G2JN53 185 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 LRRTM2O43300 516 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 STK16O75716 305 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 WISP2O76076 250 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 RASAL1O95294 804 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 EPORP19235 508 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 CD22P20273 847 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 MST1P26927 711 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 CD96P40200 585 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 STXBP1P61764 594 aaKnown RBP16.88■□□□□ 0.29
HMGN1-219ENST00000491183 TUBA3CQ13748 450 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 TUBA3EQ6PEY2 450 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 CMC1Q7Z7K0 106 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 ISCA2Q86U28 154 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 CYP4X1Q8N118 509 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 KRT78Q8N1N4 520 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 KIF2BQ8N4N8 673 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 MDS2Q8NDY4 140 aa16.88■□□□□ 0.29
HMGN1-219ENST00000491183 NFAM1Q8NET5 270 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms