RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 CCDC167Q9P0B6 97 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 COX16Q9P0S2 106 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 TSPAN16Q9UKR8 245 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 INTS6Q9UL03 887 aaKnown RBP3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 BAG5Q9UL15 447 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 TBX21Q9UL17 535 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 OGDHLQ9ULD0 1010 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC39A10Q9ULF5 831 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 FZD10Q9ULW2 581 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 MAGED2Q9UNF1 606 aaPredicted RBP3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 AURKCQ9UQB9 309 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 TNFSF13BQ9Y275 285 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 TRAPPC4Q9Y296 219 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 WBP11Q9Y2W2 641 aaKnown RBP3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 GRIP1Q9Y3R0 1128 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 CHST2Q9Y4C5 530 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 NEUROG3Q9Y4Z2 214 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 PCDHGA8Q9Y5G5 932 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 GPR45Q9Y5Y3 372 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 DOCK8Q8NF50 2099 aa3.34□□□□□ -1.88
CRNKL1-203ENST00000490258 NUP205Q92621 2012 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 DOCK9Q9BZ29 2069 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 A0A1W2PRQ8 180 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 OR2A25A4D2G3 310 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 ANTXRLA6NF34 631 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 CCDC154A6NI56 674 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 MARCH11A6NNE9 402 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 A8MU76 341 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 AHRRA9YTQ3 701 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM25AB3EWG3 89 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM25CB3EWG5 89 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM25GB3EWG6 89 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 J3KRW8 73 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 M0QZ92 97 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 MASP2O00187 686 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 NR5A2O00482 541 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 HAT1O14929 419 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 ANGPT2O15123 496 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 INPP4BO15327 924 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 HOXA3O43365 443 aaPredicted RBP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 TBC1D4O60343 1298 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 TLR5O60602 858 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 APOL3O95236 402 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 SEC24AO95486 1093 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 VNN2O95498 520 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 KRT75O95678 551 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 MT-CO1P00395 513 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 F9P00740 461 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 AHSGP02765 367 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 F7P08709 466 aaPredicted RBP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 CLTBP09497 229 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 LTA4HP09960 611 aaKnown RBP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 TGFB3P10600 412 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 UBL4AP11441 157 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 MTHFD1P11586 935 aaKnown RBP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 HSD3B1P14060 373 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 ARSAP15289 507 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 STMN1P16949 149 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 GOT1P17174 413 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 GJA1P17302 382 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 LBPP18428 481 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 RHCEP18577 417 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 GGT1P19440 569 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 EFNA1P20827 205 aaPredicted RBP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 KCNA5P22460 613 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 EEF1B2P24534 225 aaKnown RBP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 YWHAQP27348 245 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 NMBRP28336 390 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 HOXD10P28358 340 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 ADRA1AP35348 466 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 GGT5P36269 586 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 PIGAP37287 484 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 MAGEA2P43356 314 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 MAGEA11P43364 429 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 ABCG1P45844 678 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 OR1G1P47890 313 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 NRIP1P48552 1158 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 PXNP49023 591 aaPredicted RBP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 MAN2A2P49641 1150 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 PRIM2P49643 509 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 CLCN5P51795 746 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 CDH13P55290 713 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 TAS2R39P59534 338 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 ERVK-21P61565 698 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 WDR5P61964 334 aaKnown RBP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 HERVK_113P63132 956 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 GALK2Q01415 458 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 EMX1Q04741 257 aaPredicted RBP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 EMX2Q04743 252 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 HSPA14Q0VDF9 509 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 CDH17Q12864 832 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 TARDBPQ13148 414 aaKnown RBP eCLIP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 KEAP1Q14145 624 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 GALNT3Q14435 633 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 MXD4Q14582 209 aaPredicted RBP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 ACAP2Q15057 778 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 PCBP2Q15366 365 aaKnown RBP eCLIP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 TBCEQ15813 527 aaPredicted RBP3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 NPTX1Q15818 432 aa3.33□□□□□ -1.88
CRNKL1-203ENST00000490258 CDO1Q16878 200 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms