RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 UBXN8O00124 270 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 DNAJB6O75190 326 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 SMIM10L1P0DMW3 83 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 TSFMP43897 325 aaKnown RBP18.6■□□□□ 0.57
SMC4-222ENST00000490207 IRF9Q00978 393 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 TLR1Q15399 786 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 NSDHLQ15738 373 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 BTBD16Q32M84 506 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 XKR6Q5GH73 641 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 B3GNTL1Q67FW5 361 aaPredicted RBP18.6■□□□□ 0.57
SMC4-222ENST00000490207 PLAG1Q6DJT9 500 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 CCDC91Q7Z6B0 441 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 ISCA2Q86U28 154 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 FAM26EQ8N5C1 309 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 AMER2Q8N7J2 671 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 PLPP5Q8NEB5 264 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 KCTD4Q8WVF5 259 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 IFT81Q8WYA0 676 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 PTCD3Q96EY7 689 aaKnown RBP18.6■□□□□ 0.57
SMC4-222ENST00000490207 SMIM10Q96HG1 83 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 SEC16BQ96JE7 1060 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 TSPYL1Q9H0U9 437 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 NT5DC2Q9H857 520 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 CLK4Q9HAZ1 481 aaKnown RBP18.6■□□□□ 0.57
SMC4-222ENST00000490207 ACOT9Q9Y305 439 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 ASB1Q9Y576 335 aa18.6■□□□□ 0.57
SMC4-222ENST00000490207 COPG1Q9Y678 874 aaKnown RBP18.6■□□□□ 0.57
SMC4-222ENST00000490207 DYTNA2CJ06 578 aa18.59■□□□□ 0.57
SMC4-222ENST00000490207 TCP11X1B4DZS4 312 aa18.59■□□□□ 0.57
SMC4-222ENST00000490207 PSMD12O00232 456 aaPredicted RBP18.59■□□□□ 0.57
SMC4-222ENST00000490207 ACSL3O95573 720 aa18.59■□□□□ 0.57
SMC4-222ENST00000490207 HNRNPH1P31943 449 aaKnown RBP18.59■□□□□ 0.57
SMC4-222ENST00000490207 KCNC1P48547 511 aa18.59■□□□□ 0.57
SMC4-222ENST00000490207 SERPINB8P50452 374 aa18.59■□□□□ 0.57
SMC4-222ENST00000490207 SRSF1Q07955 248 aaKnown RBP eCLIP18.59■□□□□ 0.579e-8■■□□□ 13.7
SMC4-222ENST00000490207 GLE1Q53GS7 698 aaKnown RBP18.59■□□□□ 0.57
SMC4-222ENST00000490207 SFT2D3Q587I9 215 aa18.59■□□□□ 0.57
SMC4-222ENST00000490207 PAPD4Q6PIY7 484 aaKnown RBP18.59■□□□□ 0.57
SMC4-222ENST00000490207 CENPLQ8N0S6 344 aaPredicted RBP18.59■□□□□ 0.57
SMC4-222ENST00000490207 UBTD2Q8WUN7 234 aa18.59■□□□□ 0.57
SMC4-222ENST00000490207 NXNL1Q96CM4 212 aa18.59■□□□□ 0.57
SMC4-222ENST00000490207 WDR34Q96EX3 536 aa18.59■□□□□ 0.57
SMC4-222ENST00000490207 EFCAB11Q9BUY7 163 aa18.59■□□□□ 0.57
SMC4-222ENST00000490207 CD244Q9BZW8 370 aa18.59■□□□□ 0.57
SMC4-222ENST00000490207 NTNG1Q9Y2I2 539 aa18.59■□□□□ 0.57
SMC4-222ENST00000490207 PRRC2CQ9Y520 2896 aaKnown RBP18.59■□□□□ 0.57
SMC4-222ENST00000490207 SETXQ7Z333 2677 aaKnown RBP18.58■□□□□ 0.57
SMC4-222ENST00000490207 HMX2A2RU54 273 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 ANKDD1BA6NHY2 528 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 ERI3O43414 337 aaKnown RBP18.58■□□□□ 0.56
SMC4-222ENST00000490207 PRAMEF4O60810 478 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 B4GALT2O60909 372 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 CLEC3AO75596 197 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 C2P06681 752 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 RNH1P13489 461 aaKnown RBP18.58■□□□□ 0.56
SMC4-222ENST00000490207 ECHS1P30084 290 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 OR4D2P58180 307 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 CHIT1Q13231 466 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 MRPL49Q13405 166 aaKnown RBP18.58■□□□□ 0.56
SMC4-222ENST00000490207 LAPTM5Q13571 262 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 DOC2AQ14183 400 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 NR6A1Q15406 480 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 EXT1Q16394 746 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 FAM83EQ2M2I3 478 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 PAGE2BQ5JRK9 111 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 PRAMEF9Q5VWM5 478 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 QSOX2Q6ZRP7 698 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 VN1R5Q7Z5H4 357 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 CA13Q8N1Q1 262 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 CATSPER1Q8NEC5 780 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 KIF18AQ8NI77 898 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 MS4A6EQ96DS6 147 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 FAR2Q96K12 515 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 MAGEB10Q96LZ2 347 aaPredicted RBP18.58■□□□□ 0.56
SMC4-222ENST00000490207 LPAR4Q99677 370 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 FUT8Q9BYC5 575 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 RHBGQ9H310 441 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 PLA2G3Q9NZ20 509 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 OPTCQ9UBM4 332 aa18.58■□□□□ 0.56
SMC4-222ENST00000490207 FLNBO75369 2602 aaKnown RBP18.58■□□□□ 0.56
SMC4-222ENST00000490207 A0A096LPK6 155 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 A0A0G2JN53 185 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 SYCE1LA8MT33 242 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 INHBAP08476 426 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 EPORP19235 508 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 CD22P20273 847 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 HPDP32754 393 aaPredicted RBP18.57■□□□□ 0.56
SMC4-222ENST00000490207 BTN3A2P78410 334 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 IRF8Q02556 426 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 ZNF33BQ06732 778 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 ACTN3Q08043 901 aaPredicted RBP18.57■□□□□ 0.56
SMC4-222ENST00000490207 FHL5Q5TD97 284 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 ABHD17BQ5VST6 288 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 ADNP2Q6IQ32 1131 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 RHEBL1Q8TAI7 183 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 AGPAT4Q9NRZ5 378 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 TEKT2Q9UIF3 430 aa18.57■□□□□ 0.56
SMC4-222ENST00000490207 DOPEY2Q9Y3R5 2298 aa18.56■□□□□ 0.56
SMC4-222ENST00000490207 A0A088AWK7 358 aa18.56■□□□□ 0.56
SMC4-222ENST00000490207 LRIT2A6NDA9 550 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms