RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 CENPUQ71F23 418 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 TRIM46Q7Z4K8 759 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 PRUNE1Q86TP1 453 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 CILP2Q8IUL8 1156 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 SYCE1Q8N0S2 351 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 CYP4Z2PQ8N1L4 340 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 OTUD6BQ8N6M0 293 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 PRELID2Q8N945 189 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 APCDD1LQ8NCL9 501 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 OR5T3Q8NGG3 340 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 SLC13A3Q8WWT9 602 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 NANOS1Q8WY41 292 aaKnown RBP7.65□□□□□ -1.18
USP39-216ENST00000490193 MBD6Q96DN6 1003 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 HES6Q96HZ4 224 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 CCDC138Q96M89 665 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 RBCK1Q9BYM8 510 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 ZDHHC11Q9H8X9 412 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 CLK4Q9HAZ1 481 aaKnown RBP7.65□□□□□ -1.18
USP39-216ENST00000490193 DNAJB12Q9NXW2 375 aaKnown RBP7.65□□□□□ -1.18
USP39-216ENST00000490193 SOX13Q9UN79 622 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 PACSIN2Q9UNF0 486 aaPredicted RBP7.65□□□□□ -1.18
USP39-216ENST00000490193 PPIEQ9UNP9 301 aaKnown RBP7.65□□□□□ -1.18
USP39-216ENST00000490193 ZNF148Q9UQR1 794 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 OR14I1A6ND48 311 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 ZNF860A6NHJ4 632 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 GOLGA8KD6RF30 607 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 GOLGA8TH3BQL2 631 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 IPO7O95373 1038 aaKnown RBP7.64□□□□□ -1.19
USP39-216ENST00000490193 SYF2O95926 243 aaKnown RBP7.64□□□□□ -1.19
USP39-216ENST00000490193 ETS1P14921 441 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 ALOX12P18054 663 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 CCND1P24385 295 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 MGAT1P26572 445 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 ACVR2AP27037 513 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 RPL22P35268 128 aaKnown RBP7.64□□□□□ -1.19
USP39-216ENST00000490193 GRK3P35626 688 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 RFC3P40938 356 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 DLX5P56178 289 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 CDK16Q00536 496 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 PWP1Q13610 501 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 TERF2Q15554 542 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 LCTLQ6UWM7 567 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 RGS9BPQ6ZS82 235 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 UBE2R2Q712K3 238 aaPredicted RBP7.64□□□□□ -1.19
USP39-216ENST00000490193 MDGA2Q7Z553 956 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 STRA8Q7Z7C7 330 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 C17orf64Q86WR6 236 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 CCDC89Q8N998 374 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 MFSD9Q8NBP5 474 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 ZNF740Q8NDX6 193 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 ABHD11Q8NFV4 315 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 OR4K1Q8NGD4 311 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 OR52N2Q8NGI0 321 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 PTCHD1Q96NR3 888 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 USB1Q9BQ65 265 aaKnown RBP7.64□□□□□ -1.19
USP39-216ENST00000490193 TTYH2Q9BSA4 534 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 SGPP1Q9BX95 441 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 DEFB126Q9BYW3 111 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 GSX1Q9H4S2 264 aaPredicted RBP7.64□□□□□ -1.19
USP39-216ENST00000490193 ABCF3Q9NUQ8 709 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 SYBUQ9NX95 663 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 EDARQ9UNE0 448 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 SH2B3Q9UQQ2 575 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 DHRS7Q9Y394 339 aa7.64□□□□□ -1.19
USP39-216ENST00000490193 EML6Q6ZMW3 1958 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 A0A1B0GVC2 190 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 FIGNL2A6NMB9 653 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 BCKDKO14874 412 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 PROM1O43490 865 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 CHST10O43529 356 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 CEP104O60308 925 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 DNAJB6O75190 326 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 ITGA10O75578 1167 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 FTCDO95954 541 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 IGHG3P01860 377 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 TUBB4AP04350 444 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 ZSCAN5DPP0CG00 497 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 VSIG8P0DPA2 414 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 PAMP19021 973 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 TPSB2P20231 275 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 PEX19P40855 299 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 ZFP36L2P47974 494 aaKnown RBP7.63□□□□□ -1.19
USP39-216ENST00000490193 CLCN2P51788 898 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 NR0B1P51843 470 aaKnown RBP7.63□□□□□ -1.19
USP39-216ENST00000490193 GPR85P60893 370 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 ADAM8P78325 824 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 BTG2P78543 158 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 CUL1Q13616 776 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 TPSAB1Q15661 275 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 CEBPEQ15744 281 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 SLC25A35Q3KQZ1 300 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 GXYLT1Q4G148 440 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 LRRC8EQ6NSJ5 796 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 NEPROQ6NW34 567 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 ZNF549Q6P9A3 640 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 DRICH1Q6PGQ1 229 aaPredicted RBP7.63□□□□□ -1.19
USP39-216ENST00000490193 AGTRAPQ6RW13 159 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 CES3Q6UWW8 571 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 RAD9BQ6WBX8 426 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 CAMKMTQ7Z624 323 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms