RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 MCCC2Q9HCC0 563 aa14.85□□□□□ -0.03
PLOD3-216ENST00000489927 ZFP69BQ9UJL9 534 aa14.85□□□□□ -0.03
PLOD3-216ENST00000489927 IGKV3D-11A0A0A0MRZ8 115 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 TCRBV16S1A1N1A0A5B0 115 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 TFECO14948 347 aaPredicted RBP14.84□□□□□ -0.03
PLOD3-216ENST00000489927 AHSGP02765 367 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 PGAM1P18669 254 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 PTGS2P35354 604 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 RFC3P40938 356 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 HNF4AP41235 474 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 SCTRP47872 440 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 MEOX1P50221 254 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 PGGT1BP53609 377 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 AP1S2P56377 157 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 RAB8AP61006 207 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 CSHL1Q14406 222 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 NIPAL1Q6NVV3 410 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 CCDC137Q6PK04 289 aaKnown RBP14.84□□□□□ -0.03
PLOD3-216ENST00000489927 SULF2Q8IWU5 870 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 EID3Q8N140 333 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 ARMC10Q8N2F6 343 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 TBC1D19Q8N5T2 526 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 POGLUT1Q8NBL1 392 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 FAM57AQ8TBR7 257 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 UTP15Q8TED0 518 aaKnown RBP14.84□□□□□ -0.03
PLOD3-216ENST00000489927 SLC5A11Q8WWX8 675 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 NEIL2Q969S2 332 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 TREX2Q9BQ50 279 aaPredicted RBP14.84□□□□□ -0.03
PLOD3-216ENST00000489927 DEFB126Q9BYW3 111 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 NECTIN3Q9NQS3 549 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 PRDM9Q9NQV7 894 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 COQ3Q9NZJ6 369 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 CACNA1CQ13936 2221 aa14.84□□□□□ -0.03
PLOD3-216ENST00000489927 A0A1B0GTH9 108 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 PABPN1LA6NDY0 278 aaKnown RBP14.83□□□□□ -0.04
PLOD3-216ENST00000489927 A8MUA0 341 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 FCHO1O14526 889 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 HS6ST1O60243 411 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 GUCA1CO95843 209 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 AHRP35869 848 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 IL2P60568 153 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 HYAL2Q12891 473 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 CYP1B1Q16678 543 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 CD163Q86VB7 1156 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 RASGEF1CQ8N431 466 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 MARVELD2Q8N4S9 558 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 ANKRD53Q8N9V6 530 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 FBXL8Q96CD0 374 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 TSNARE1Q96NA8 513 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 SLC6A16Q9GZN6 736 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 RHBGQ9H310 441 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 SLC17A6Q9P2U8 582 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 KLF13Q9Y2Y9 288 aaPredicted RBP14.83□□□□□ -0.04
PLOD3-216ENST00000489927 HRH3Q9Y5N1 445 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 NF1P21359 2839 aa14.83□□□□□ -0.04
PLOD3-216ENST00000489927 C4orf51C9J302 202 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 KLRC4-KLRK1H3BQV0 150 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 PSMD12O00232 456 aaPredicted RBP14.82□□□□□ -0.04
PLOD3-216ENST00000489927 PEX1O43933 1283 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 CDC40O60508 579 aaKnown RBP eCLIP14.82□□□□□ -0.04
PLOD3-216ENST00000489927 BANF1O75531 89 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 TPOP07202 933 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 SMIM10L1P0DMW3 83 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 RNH1P13489 461 aaKnown RBP14.82□□□□□ -0.04
PLOD3-216ENST00000489927 PDAP1Q13442 181 aaKnown RBP14.82□□□□□ -0.04
PLOD3-216ENST00000489927 CMPK2Q5EBM0 449 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 SPNS3Q6ZMD2 512 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 CEP128Q6ZU80 1094 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 CNTN4Q8IWV2 1026 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 PPIL6Q8IXY8 311 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 APCDD1LQ8NCL9 501 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 ATL1Q8WXF7 558 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 SMIM10Q96HG1 83 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 TRIM54Q9BYV2 358 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 KLHL31Q9H511 634 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 CLK4Q9HAZ1 481 aaKnown RBP14.82□□□□□ -0.04
PLOD3-216ENST00000489927 ZFATQ9P243 1243 aa14.82□□□□□ -0.04
PLOD3-216ENST00000489927 SETD2Q9BYW2 2564 aaPredicted RBP14.81□□□□□ -0.04
PLOD3-216ENST00000489927 TRBV11-1A0A0K0K1C0 115 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 MYO1DO94832 1006 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 TFEBP19484 476 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 GPR85P60893 370 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 REEP5Q00765 189 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 RNASEH2BQ5TBB1 312 aaKnown RBP14.81□□□□□ -0.04
PLOD3-216ENST00000489927 KIAA0408Q6ZU52 694 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 MDGA2Q7Z553 956 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 CYP4Z2PQ8N1L4 340 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 CA13Q8N1Q1 262 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 ZFP62Q8NB50 900 aaPredicted RBP14.81□□□□□ -0.04
PLOD3-216ENST00000489927 ARMC2Q8NEN0 867 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 B3GNT7Q8NFL0 401 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 C16orf52Q8NHV5 167 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 GABPB2Q8TAK5 448 aaPredicted RBP14.81□□□□□ -0.04
PLOD3-216ENST00000489927 IKZF3Q9UKT9 509 aa14.81□□□□□ -0.04
PLOD3-216ENST00000489927 GTF3C1Q12789 2109 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 URADA6NGE7 173 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 FANCGO15287 622 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 ITGA10O75578 1167 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 TTC4O95801 387 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 ENO2P09104 434 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms