RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 STYXL1Q9Y6J8 313 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 ARHGEF37A1IGU5 675 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 ARHGEF33A8MVX0 844 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 TRAFD1O14545 582 aaPredicted RBP4.11□□□□□ -1.75
CCDC39-206ENST00000489868 ZNF749O43361 778 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 ACSL4O60488 711 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 SIX3O95343 332 aaPredicted RBP4.11□□□□□ -1.75
CCDC39-206ENST00000489868 C9P02748 559 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 SRD5A2P31213 254 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 FEN1P39748 380 aaKnown RBP4.11□□□□□ -1.75
CCDC39-206ENST00000489868 GRB14Q14449 540 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 DCLRE1AQ6PJP8 1040 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 CDHR3Q6ZTQ4 885 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 FAM47EQ6ZV65 393 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 Q6ZVQ6 151 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 GLRX5Q86SX6 157 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 PHC2Q8IXK0 858 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 THNSL1Q8IYQ7 743 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 GRK7Q8WTQ7 553 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 TSSK2Q96PF2 358 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 PUS3Q9BZE2 481 aaKnown RBP4.11□□□□□ -1.75
CCDC39-206ENST00000489868 MINDY3Q9H8M7 445 aa4.11□□□□□ -1.75
CCDC39-206ENST00000489868 HBS1LQ9Y450 684 aaKnown RBP4.11□□□□□ -1.75
CCDC39-206ENST00000489868 TRAV34A0A0B4J273 112 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 ZNF732B4DXR9 585 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 K7EQG2 157 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 HSPA4LO95757 839 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 VIMP08670 466 aaKnown RBP4.1□□□□□ -1.75
CCDC39-206ENST00000489868 TSPY3P0CV98 308 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 TSPY8P0CW00 308 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 GIFP27352 417 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 ERVK-16P61578 105 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 TSPY1Q01534 308 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 FCHO2Q0JRZ9 810 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 RIGQ13278 110 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 MLF2Q15773 248 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-206ENST00000489868 MPP7Q5T2T1 576 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 KCNMB4Q86W47 210 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 CARM1Q86X55 608 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 MEX3DQ86XN8 651 aaKnown RBP4.1□□□□□ -1.75
CCDC39-206ENST00000489868 LINC00612Q8N6U2 182 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 CCDC185Q8N715 623 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 SETD6Q8TBK2 473 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 SPPL2AQ8TCT8 520 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-206ENST00000489868 BSCL2Q96G97 398 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-206ENST00000489868 ADNPQ9H2P0 1102 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 RPF1Q9H9Y2 349 aaKnown RBP4.1□□□□□ -1.75
CCDC39-206ENST00000489868 C3orf14Q9HBI5 128 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 NCKAP1Q9Y2A7 1128 aa4.1□□□□□ -1.75
CCDC39-206ENST00000489868 A0A0B4J203 849 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 ANHXE9PGG2 379 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 ST8SIA3O43173 380 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 TNFSF12O43508 249 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 BCL2L11O43521 198 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 MTRF1O75570 445 aaKnown RBP4.09□□□□□ -1.75
CCDC39-206ENST00000489868 PRDM1O75626 825 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 RPN1P04843 607 aaKnown RBP4.09□□□□□ -1.75
CCDC39-206ENST00000489868 ITIH1P19827 911 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 FOLH1Q04609 750 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 SIX1Q15475 284 aaPredicted RBP4.09□□□□□ -1.75
CCDC39-206ENST00000489868 C17orf107Q6ZR85 190 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 C15orf52Q6ZUT6 534 aaKnown RBP4.09□□□□□ -1.75
CCDC39-206ENST00000489868 SLC25A42Q86VD7 318 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 HPS6Q86YV9 775 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 CORO2AQ92828 525 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 SGF29Q96ES7 293 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 PCDHB18PQ96TA0 734 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 PRMT1Q99873 361 aaKnown RBP4.09□□□□□ -1.75
CCDC39-206ENST00000489868 ATF6BQ99941 703 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 EDEM3Q9BZQ6 932 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 DPEP2Q9H4A9 486 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 MRGBPQ9NV56 204 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 GTSE1Q9NYZ3 720 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 PCDHGA1Q9Y5H4 931 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 RNF123Q5XPI4 1314 aa4.09□□□□□ -1.75
CCDC39-206ENST00000489868 PHF1O43189 567 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-206ENST00000489868 PKLRP30613 574 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 PTGER3P43115 390 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 OR3A3P47888 321 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 KCNJ1P48048 391 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 KHKP50053 298 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 EVCP57679 992 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 ITPK1Q13572 414 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 KNOP1Q1ED39 458 aaKnown RBP4.08□□□□□ -1.76
CCDC39-206ENST00000489868 MACC1Q6ZN28 852 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 METTL23Q86XA0 190 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 OR4N5Q8IXE1 308 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 GBP5Q96PP8 586 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 RPP25Q9BUL9 199 aaKnown RBP4.08□□□□□ -1.76
CCDC39-206ENST00000489868 JPT2Q9H910 190 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 ZCCHC17Q9NP64 241 aaKnown RBP4.08□□□□□ -1.76
CCDC39-206ENST00000489868 TMOD3Q9NYL9 352 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 POMT1Q9Y6A1 747 aa4.08□□□□□ -1.76
CCDC39-206ENST00000489868 SRRM4A7MD48 611 aaKnown RBP4.07□□□□□ -1.76
CCDC39-206ENST00000489868 GALR3O60755 368 aaPredicted RBP4.07□□□□□ -1.76
CCDC39-206ENST00000489868 EIF5BO60841 1220 aaKnown RBP4.07□□□□□ -1.76
CCDC39-206ENST00000489868 CTNNA2P26232 953 aa4.07□□□□□ -1.76
CCDC39-206ENST00000489868 MAPK11Q15759 364 aa4.07□□□□□ -1.76
CCDC39-206ENST00000489868 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms