RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ZNF670-ZNF695F2Z2N8 137 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 M0R233 179 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 FZD9O00144 591 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 DDX39AO00148 427 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 AIPO00170 330 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 QSOX1O00391 747 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 ACKR2O00590 384 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PDCD5O14737 125 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PSMD3O43242 534 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 NDUFS6O75380 124 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 HTR3BO95264 441 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 DHFRP00374 187 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 CFDP00746 253 aaPredicted RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PLATP00750 562 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PTHP01270 115 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 IL1AP01583 271 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PIGRP01833 764 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 S100A9P06702 114 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 ADRB1P08588 477 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 LINC00032P0C843 101 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 SMIM6P0DI80 62 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC2A2P11168 524 aaPredicted RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 CKMT1AP12532 417 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PTPRAP18433 802 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 FPR1P21462 350 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 EPHA1P21709 976 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 STOMP27105 288 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 NMBRP28336 390 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 MAGEA2P43356 314 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 TGM4P49221 684 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF81P51508 661 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PGGT1BP53609 377 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 TAS2R39P59534 338 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 UFM1P61960 85 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 NFKB2Q00653 900 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 LGALS3BPQ08380 585 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 ST3GAL4Q11206 333 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PRKG2Q13237 762 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 CSHL1Q14406 222 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 SMAD2Q15796 467 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC14A2Q15849 920 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 TSTQ16762 297 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PFKFB4Q16877 469 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 CDO1Q16878 200 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 AP5B1Q2VPB7 878 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF284Q2VY69 593 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 CERCAMQ5T4B2 595 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 KCTD11Q693B1 232 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 NCBP2-AS2Q69YL0 99 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 OVOS1Q6IE37 1185 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 OR2T5Q6IEZ7 315 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 OR6B2Q6IFH4 312 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PYHIN1Q6K0P9 492 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 BHLHB9Q6PI77 547 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 VHLLQ6RSH7 139 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 RPS27LQ71UM5 84 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 DET1Q7L5Y6 550 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF605Q86T29 641 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 C12orf40Q86WS4 652 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 ZFAND4Q86XD8 727 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 CCDC71Q8IV32 467 aaPredicted RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 NKAIN4Q8IVV8 208 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 MFSD6LQ8IWD5 586 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC34A3Q8N130 599 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF567Q8N184 647 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 CLDN22Q8N7P3 220 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF565Q8N9K5 539 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 CAMKVQ8NCB2 501 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 BVESQ8NE79 360 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 OR1M1Q8NGA1 313 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 OR4F6Q8NGB9 312 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 OR11H4Q8NGC9 324 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 OR6P1Q8NGX9 317 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 OR2T4Q8NH00 348 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 OR2T29Q8NH02 315 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 CEP76Q8TAP6 659 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 CREB3L4Q8TEY5 395 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PCNPQ8WW12 178 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 LPPQ93052 612 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 UCN3Q969E3 161 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 UBE2FQ969M7 185 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 GTPBP3Q969Y2 492 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM162AQ96A26 154 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 UPRTQ96BW1 309 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PHF21BQ96EK2 531 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 TSPAN17Q96FV3 270 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PYURFQ96I23 114 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 TEX37Q96LM6 180 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 ERMAPQ96PL5 475 aaPredicted RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 CSPG4P5Q96PW8 444 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 PSMG3-AS1Q96PY0 264 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 OR5M11Q96RB7 305 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 TMEM209Q96SK2 561 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 KCNJ15Q99712 375 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 APOL2Q9BQE5 337 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 DPH7Q9BTV6 452 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 TAPBPLQ9BX59 468 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 TINAGL1Q9GZM7 467 aaPredicted RBP4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 DNTTIP1Q9H147 329 aa4.59□□□□□ -1.67
SNRNP40-206ENST00000489853 MIXL1Q9H2W2 232 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms