RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 A0A0J9YVX5 310 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 HYKKA2RU49 373 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 K7EM74 188 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 NRP2O60462 931 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 TROVE2P10155 538 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 EZRP15311 586 aaKnown RBP10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 SERPINB5P36952 375 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 SLC1A6P48664 564 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 EMP3P54852 163 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 FOXA1P55317 472 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 RELAQ04206 551 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 GALNT1Q10472 559 aaPredicted RBP10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 ASPHQ12797 758 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 CDC16Q13042 620 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 LCP2Q13094 533 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 STX3Q13277 289 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 ATP1A4Q13733 1029 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 SLC9A5Q14940 896 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 PRAMEF13Q5VWM6 474 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 ICE2Q659A1 982 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 FRMPD2BQ6IN97 320 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 CAPN13Q6MZZ7 669 aaPredicted RBP10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 LETMD1Q6P1Q0 360 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 PRMT9Q6P2P2 845 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 SLCO4C1Q6ZQN7 724 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 OVCH1Q7RTY7 1134 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 HPS6Q86YV9 775 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 LRRC34Q8IZ02 419 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 TRPC4APQ8TEL6 797 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 NEIL2Q969S2 332 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 WDR34Q96EX3 536 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 C7orf26Q96N11 449 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 ZNF382Q96SR6 550 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 TRMOQ9BU70 441 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 NTMT1Q9BV86 223 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 SHCBP1LQ9BZQ2 653 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 SLC26A1Q9H2B4 701 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 SPNS1Q9H2V7 528 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 NOL11Q9H8H0 719 aaKnown RBP10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 IPPKQ9H8X2 491 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 SYNPO2LQ9H987 977 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 SLC6A20Q9NP91 592 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 SEMA4BQ9NPR2 832 aaPredicted RBP10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 CCDC177Q9NQR7 707 aaPredicted RBP10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 SLC22A11Q9NSA0 550 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 CUEDC1Q9NWM3 386 aaPredicted RBP10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 TAC3Q9UHF0 121 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 ZDHHC2Q9UIJ5 367 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 ARL2BPQ9Y2Y0 163 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 ZNF451Q9Y4E5 1061 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 BOD1L1Q8NFC6 3051 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 LOC105369274A0A096LPK9 316 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 LOC102723532A0A0G2JNH3 316 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 TMEM233B4DJY2 109 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 PYCARD-AS1I3L0S3 204 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 TXNDC9O14530 226 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 ZNF195O14628 629 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 SEC16AO15027 2179 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 SNX3O60493 162 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 KLHL41O60662 606 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 EDF1O60869 148 aaKnown RBP10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 CNOT3O75175 753 aaKnown RBP10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 WFS1O76024 890 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 PDGFAP04085 211 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 UMODP07911 640 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 ATXN8OSP0DMR3 200 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 EPB42P16452 691 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 ITGAXP20702 1163 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 HRH2P25021 359 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 CASP2P42575 452 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 NAA20P61599 178 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 MUM1Q2TAK8 710 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 UGT3A2Q3SY77 523 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 CATSPEREQ5SY80 951 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 THEMIS2Q5TEJ8 643 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 ZNF425Q6IV72 752 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 FBXO42Q6P3S6 717 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 FAM47EQ6ZV65 393 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 MAVSQ7Z434 540 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 SPATA21Q7Z572 469 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 CUZD1Q86UP6 607 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 PAQR7Q86WK9 346 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 OR4N4Q8N0Y3 316 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 ZNF781Q8N8C0 355 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 L3MBTL4Q8NA19 623 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 CLEC1AQ8NC01 280 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 CDK15Q96Q40 435 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 KCNA7Q96RP8 456 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 ELAC2Q9BQ52 826 aaKnown RBP10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 PCBD2Q9H0N5 130 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 THAP1Q9NVV9 213 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 P4HTMQ9NXG6 502 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 GPR83Q9NYM4 423 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 GPRC5BQ9NZH0 403 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 CDC14AQ9UNH5 594 aa10.03□□□□□ -0.8
SCAMP4-208ENST00000489554 PABPN1LA6NDY0 278 aaKnown RBP10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 H0YGG7 62 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 DPM1O60762 260 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 OR4F21O95013 312 aa10.02□□□□□ -0.81
SCAMP4-208ENST00000489554 TGDSO95455 350 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms