RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ALKBH5Q6P6C2 394 aaKnown RBP8.5□□□□□ -1.05
SSBP1-212ENST00000489378 HIPK1Q86Z02 1210 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 CCDC50Q8IVM0 306 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 FAM109AQ8N4B1 249 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 MAPK1IP1LQ8NDC0 245 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 OR5T3Q8NGG3 340 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 ZCCHC10Q8TBK6 192 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 MCOLN3Q8TDD5 553 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 STYXQ8WUJ0 223 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 SKA2Q8WVK7 121 aaPredicted RBP8.5□□□□□ -1.05
SSBP1-212ENST00000489378 P3H4Q92791 437 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 SARAFQ96BY9 339 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 CCL19Q99731 98 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 CARD6Q9BX69 1037 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 PACSIN1Q9BY11 444 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 SPATA7Q9P0W8 599 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 UVRAGQ9P2Y5 699 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 TAC3Q9UHF0 121 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 ERVK-11Q9UQG0 969 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 AAR2Q9Y312 384 aaKnown RBP8.5□□□□□ -1.05
SSBP1-212ENST00000489378 A8MUA0 341 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 KCNAB3O43448 404 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 SUSD5O60279 629 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 ERGP11308 486 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 TNNT1P13805 278 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 GABRA1P14867 456 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 PSMA3P25788 255 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 CEACAM8P31997 349 aaPredicted RBP8.49□□□□□ -1.05
SSBP1-212ENST00000489378 AGFG1P52594 562 aaKnown RBP8.49□□□□□ -1.05
SSBP1-212ENST00000489378 ZNF136P52737 540 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 MYL5Q02045 173 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 RELAQ04206 551 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 PRDX1Q06830 199 aaKnown RBP8.49□□□□□ -1.05
SSBP1-212ENST00000489378 TRIM14Q14142 442 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 TFDP2Q14188 446 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 CAPRIN1Q14444 709 aaKnown RBP8.49□□□□□ -1.05
SSBP1-212ENST00000489378 SEMA3AQ14563 771 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 NDUFAF5Q5TEU4 345 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 ITPRIPL1Q6GPH6 555 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 KIAA0408Q6ZU52 694 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 ADCK2Q7Z695 626 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 APCDD1LQ8NCL9 501 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 SMPDL3AQ92484 453 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 SMPDL3BQ92485 455 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 SYN2Q92777 582 aaPredicted RBP8.49□□□□□ -1.05
SSBP1-212ENST00000489378 DACH2Q96NX9 599 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 NUP62CLQ9H1M0 184 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 LDAHQ9H6V9 325 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 EXO5Q9H790 373 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 PIH1D1Q9NWS0 290 aaKnown RBP8.49□□□□□ -1.05
SSBP1-212ENST00000489378 ZNF223Q9UK11 482 aaPredicted RBP8.49□□□□□ -1.05
SSBP1-212ENST00000489378 NENFQ9UMX5 172 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 CR1P17927 2039 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 NCKAP5O14513 1909 aa8.49□□□□□ -1.05
SSBP1-212ENST00000489378 HEATR5AQ86XA9 2040 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 A0A087X1B8 175 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 MROH6A6NGR9 719 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 EEF1E1-BLOC1S5C9J1V9 151 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 F8W8V4 182 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 EEF1E1O43324 174 aaKnown RBP8.48□□□□□ -1.05
SSBP1-212ENST00000489378 B4GALT2O60909 372 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 OR6B1O95007 311 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 FHP07954 510 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 FREM3P0C091 2139 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 CCNFP41002 786 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 PTH2RP49190 550 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 SSR4P51571 173 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 NR1H2P55055 460 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 BTG2P78543 158 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 HYAL2Q12891 473 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 PRPSAP1Q14558 356 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 TMED2Q15363 201 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 XKR6Q5GH73 641 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.48□□□□□ -1.05
SSBP1-212ENST00000489378 ANKRD20A2Q5SQ80 823 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 ANKRD20A1Q5TYW2 823 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 ANKRD20A3Q5VUR7 823 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 KIAA0930Q6ICG6 404 aaPredicted RBP8.48□□□□□ -1.05
SSBP1-212ENST00000489378 MAATS1Q7Z4T9 603 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 KCT2Q8NC54 265 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 PPFIBP2Q8ND30 876 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 OR1F2PQ96R84 312 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 C19orf24Q9BVV8 132 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 TSSK1BQ9BXA7 367 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 GSX2Q9BZM3 304 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 EPB41L4BQ9H329 900 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 ALG2Q9H553 416 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 LIN28AQ9H9Z2 209 aaKnown RBP8.48□□□□□ -1.05
SSBP1-212ENST00000489378 UBTD1Q9HAC8 227 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 IL1RL2Q9HB29 575 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 ANKHQ9HCJ1 492 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 SEMA4BQ9NPR2 832 aaPredicted RBP8.48□□□□□ -1.05
SSBP1-212ENST00000489378 ABCF3Q9NUQ8 709 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 ZNF629Q9UEG4 869 aaPredicted RBP8.48□□□□□ -1.05
SSBP1-212ENST00000489378 FEZ2Q9UHY8 353 aaPredicted RBP8.48□□□□□ -1.05
SSBP1-212ENST00000489378 FBXW2Q9UKT8 454 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 NAALAD2Q9Y3Q0 740 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 HYOU1Q9Y4L1 999 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 PCDHA3Q9Y5H8 950 aa8.48□□□□□ -1.05
SSBP1-212ENST00000489378 TGP01266 2768 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms