RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 JAK1P23458 1154 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 MST1P26927 711 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 GMPRP36959 345 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 GP5P40197 560 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 CD96P40200 585 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 SLC6A12P48065 614 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 SLC26A5P58743 744 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 ETF1P62495 437 aaKnown RBP11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 BTN3A2P78410 334 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 ILF2Q12905 390 aaKnown RBP11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 SLBPQ14493 270 aaKnown RBP eCLIP11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 OR4D1Q15615 310 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 INAQ16352 499 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 NIPAL1Q6NVV3 410 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 TMIGD1Q6UXZ0 262 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 CYS1Q717R9 158 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 CCDC25Q86WR0 208 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 CTAGE3PQ8IX95 158 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 KLHDC8AQ8IYD2 350 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 CCT6BQ92526 530 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 NR4A3Q92570 626 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 ESAMQ96AP7 390 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 GPR22Q99680 433 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 RBBP8Q99708 897 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 ICE1Q9Y2F5 2266 aa11.21□□□□□ -0.62
CCHCR1-215ENST00000488920 SCN3AQ9NY46 2000 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 A0A0G2JN53 185 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 LRIT2A6NDA9 550 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 A8MUA0 341 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 PSMD12O00232 456 aaPredicted RBP11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 WISP2O76076 250 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 C1QAP02745 245 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 GSTA2P09210 222 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 RNH1P13489 461 aaKnown RBP11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 CD1DP15813 335 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 GGT5P36269 586 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 MAGEA4P43358 317 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 KCNC1P48547 511 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 HSPA7P48741 367 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 TDGF1P3P51864 188 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 ATP6V0D1P61421 351 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 STXBP1P61764 594 aaKnown RBP11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 PMP22Q01453 160 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 TUBA3CQ13748 450 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 RUNX2Q13950 521 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 MEP1AQ16819 746 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 KBTBD12Q3ZCT8 623 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 ZNF766Q5HY98 468 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 C1QL3Q5VWW1 255 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 SPINK14Q6IE38 97 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 TUBA3EQ6PEY2 450 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 GFRALQ6UXV0 394 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 CA13Q8N1Q1 262 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 KIF2BQ8N4N8 673 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 SLC5A8Q8N695 610 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 PPM1NQ8N819 430 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 SNX31Q8N9S9 440 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 FBXO25Q8TCJ0 367 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 FAR2Q96K12 515 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 SIGLEC12Q96PQ1 595 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 UTP23Q9BRU9 249 aaKnown RBP11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 TMEM79Q9BSE2 394 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 CDCP1Q9H5V8 836 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 CLK4Q9HAZ1 481 aaKnown RBP11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 NECTIN3Q9NQS3 549 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 KLHL1Q9NR64 748 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 DNAJC11Q9NVH1 559 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 WWOXQ9NZC7 414 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 CD274Q9NZQ7 290 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 ABI3Q9P2A4 366 aa11.2□□□□□ -0.62
CCHCR1-215ENST00000488920 SPTBN1Q01082 2364 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 GABRR3A8MPY1 467 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 CLGNO14967 610 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 ERI3O43414 337 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 PRAMEF4O60810 478 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 STK16O75716 305 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 UNC5CO95185 931 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 CRYABP02511 175 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 STSP08842 583 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 HNRNPH1P31943 449 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 SPRP35270 261 aaPredicted RBP11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 TAS2R50P59544 299 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 RAB10P61026 200 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 SLC7A5Q01650 507 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 OC90Q02509 493 aaPredicted RBP11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 CAV1Q03135 178 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 OR1C1Q15619 314 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 GRTP1Q5TC63 336 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 PRAMEF9Q5VWM5 478 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 ZNF787Q6DD87 383 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 SULT1C3Q6IMI6 304 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 ZDHHC24Q6UX98 284 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 QSOX2Q6ZRP7 698 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 FJX1Q86VR8 437 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 KRT78Q8N1N4 520 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 TCAIMQ8N3R3 496 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 MDS2Q8NDY4 140 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 TTLQ8NG68 377 aa11.19□□□□□ -0.62
CCHCR1-215ENST00000488920 DNAJB8Q8NHS0 232 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms