RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 YBEYP58557 167 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 GCNT1Q02742 428 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ITGA9Q13797 1035 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 HNRNPDQ14103 355 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 CLPPQ16740 277 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 CDO1Q16878 200 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 USH1GQ495M9 461 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 XKR3Q5GH77 459 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 SLC25A53Q5H9E4 307 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 LRRC73Q5JTD7 316 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 LCN1P1Q5VSP4 162 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ADAM5Q6NVV9 412 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ARMCX5Q6P1M9 558 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 CYB5D1Q6P9G0 228 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 FAM228AQ86W67 206 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ITPRIPQ8IWB1 547 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 KIRREL3Q8IZU9 778 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 SIX6OS1Q8N1H7 587 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 LRRC43Q8N309 656 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 RAB42Q8N4Z0 105 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ANKRD13CQ8N6S4 541 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 RASGEF1AQ8N9B8 481 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 NOA1Q8NC60 698 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 TBC1D31Q96DN5 1066 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 PRAC1Q96KF2 57 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 CCDC28BQ9BUN5 200 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 MLPHQ9BV36 600 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 KATNB1Q9BVA0 655 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 CAPS2Q9BXY5 557 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 PITPNM3Q9BZ71 974 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ZMYND12Q9H0C1 365 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 FAM49AQ9H0Q0 323 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 P2RY12Q9H244 342 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 MMADHCQ9H3L0 296 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 SLC40A1Q9NP59 571 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 GSN-AS1Q9NRJ2 163 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ERAP1Q9NZ08 941 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 MDFICQ9P1T7 246 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 C19orf25Q9UFG5 118 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 HOOK1Q9UJC3 728 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 TMCC3Q9ULS5 477 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 C15orf41Q9Y2V0 281 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ASB3Q9Y575 518 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 NPHP4O75161 1426 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 UBN2Q6ZU65 1347 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 KDM5AP29375 1690 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 ATP7BP35670 1465 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 IFT140Q96RY7 1462 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 CDK12Q9NYV4 1490 aaPredicted RBP3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 NUP155O75694 1391 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 TUBGCP6Q96RT7 1819 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 A0A087WW49 117 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 TRAV24A0A0B4J272 114 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 A0A1W2PPK0 400 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 CFAP73A6NFT4 308 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 E7ENQ6 273 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 O00370 1275 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 PGLSO95336 258 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 PAK4O96013 591 aaPredicted RBP3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 GSRP00390 522 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 SLC4A1P02730 911 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 C9P02748 559 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 APOHP02749 345 aaPredicted RBP3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 RAF1P04049 648 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 GPIP06744 558 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 ZFYP08048 801 aaPredicted RBP3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 ATP6V1B1P15313 513 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 LHCGRP22888 699 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 TLX1P31314 330 aaPredicted RBP3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 TCF7P36402 384 aaPredicted RBP3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 VAMP7P51809 220 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 HSD17B7P56937 341 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 ILF2Q12905 390 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 IFT88Q13099 833 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 SNX1Q13596 522 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 TEAD2Q15562 447 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 MPP7Q5T2T1 576 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 OR4A47Q6IF82 309 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 NOTUMQ6P988 496 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 UNC5DQ6UXZ4 953 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 KDM7AQ6ZMT4 941 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 G2E3Q7L622 706 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 OTUD6AQ7L8S5 288 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 LCA5Q86VQ0 697 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 MARVELD2Q8N4S9 558 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 ADAD2Q8NCV1 583 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 GPRC5AQ8NFJ5 357 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 OR10Q1Q8NGQ4 319 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 ERMNQ8TAM6 284 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 GDAP1Q8TB36 358 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 HCAR2Q8TDS4 363 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 MRGPRDQ8TDS7 321 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 SEPT1Q8WYJ6 367 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 DYRK2Q92630 601 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 PTP4A1Q93096 173 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 SLC35B4Q969S0 331 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 MAGED4Q96JG8 741 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 IWS1Q96ST2 819 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 TSC22D3Q99576 134 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms