RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 BHLHE41Q9C0J9 482 aaPredicted RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 EVA1BQ9NVM1 165 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 SPASTQ9UBP0 616 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 USP22Q9UPT9 525 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 PCDHB3Q9Y5E6 796 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 GMEB1Q9Y692 573 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 A0A0A6YYD5 115 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 GSAPA4D1B5 854 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 OR5K3A6NET4 321 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 RNASET2O00584 256 aaKnown RBP9□□□□□ -0.97
SF3B1-211ENST00000487698 BCAT2O15382 392 aaPredicted RBP9□□□□□ -0.97
SF3B1-211ENST00000487698 ZW10O43264 779 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 AQP9O43315 295 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 NOBOXO60393 691 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 TBX19O60806 448 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 LSSP48449 732 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 FNTBP49356 437 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 CSNK1EP49674 416 aaKnown RBP9□□□□□ -0.97
SF3B1-211ENST00000487698 GZMMP51124 257 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 AFF3P51826 1226 aaKnown RBP9□□□□□ -0.97
SF3B1-211ENST00000487698 MAPK12P53778 367 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 SESN3P58005 492 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 OR4D2P58180 307 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 HNRNPKP61978 463 aaKnown RBP eCLIP9□□□□□ -0.97
SF3B1-211ENST00000487698 MC1RQ01726 317 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 RELAQ04206 551 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 KLC1Q07866 573 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 LRRC74AQ0VAA2 488 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 MPEG1Q2M385 716 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 MUM1Q2TAK8 710 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 ANXA8L1Q5VT79 327 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 OR4C11Q6IEV9 310 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 CYP2R1Q6VVX0 501 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 R3HCC1LQ7Z5L2 792 aaKnown RBP9□□□□□ -0.97
SF3B1-211ENST00000487698 WDR5BQ86VZ2 330 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 SPATA24Q86W54 205 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 CLECL1Q8IZS7 167 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 SDR16C5Q8N3Y7 309 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 AVL9Q8NBF6 648 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 LMX1AQ8TE12 382 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 TM4SF18Q96CE8 201 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 AURKBQ96GD4 344 aaPredicted RBP9□□□□□ -0.97
SF3B1-211ENST00000487698 ZNF764Q96H86 408 aaPredicted RBP9□□□□□ -0.97
SF3B1-211ENST00000487698 GBP5Q96PP8 586 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 PHF12Q96QT6 1004 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 SH3GL1Q99961 368 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 SLC6A16Q9GZN6 736 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 KLHL31Q9H511 634 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 KAT8Q9H7Z6 458 aaKnown RBP9□□□□□ -0.97
SF3B1-211ENST00000487698 UCK1Q9HA47 277 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 EGFL7Q9UHF1 273 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 PILRAQ9UKJ1 303 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 AP3M1Q9Y2T2 418 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 SNX13Q9Y5W8 968 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 ARID1BQ8NFD5 2236 aaPredicted RBP9□□□□□ -0.97
SF3B1-211ENST00000487698 CABIN1Q9Y6J0 2220 aa9□□□□□ -0.97
SF3B1-211ENST00000487698 AQP12BA6NM10 295 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 LMO7DNF2Z398 122 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 PPM1DO15297 605 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 TMPRSS11DO60235 418 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 CTSVO60911 334 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 GSNP06396 782 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 ZCCHC18P0CG32 403 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 DDCP20711 480 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 MAZP56270 477 aaKnown RBP8.99□□□□□ -0.97
SF3B1-211ENST00000487698 C2orf80Q0P641 193 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 SLC14A1Q13336 389 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 SIM2Q14190 667 aaPredicted RBP8.99□□□□□ -0.97
SF3B1-211ENST00000487698 PRSS53Q2L4Q9 553 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 TJAP1Q5JTD0 557 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 IRAK1BP1Q5VVH5 260 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 FBXO42Q6P3S6 717 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 ABHD17CQ6PCB6 329 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 ZNF793Q6ZN11 406 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 LRRC74BQ6ZQY2 392 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 IFNEQ86WN2 208 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 CALHM3Q86XJ0 350 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 ZNF761Q86XN6 746 aaPredicted RBP8.99□□□□□ -0.97
SF3B1-211ENST00000487698 AQP12AQ8IXF9 295 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 ARL14Q8N4G2 192 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 GOLM1Q8NBJ4 401 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 OR2L5Q8NG80 312 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 GOT1L1Q8NHS2 421 aaPredicted RBP8.99□□□□□ -0.97
SF3B1-211ENST00000487698 NT5CQ8TCD5 201 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 EDAQ92838 391 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 PPCDCQ96CD2 204 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 TM4SF19Q96DZ7 209 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 RSRC1Q96IZ7 334 aaKnown RBP8.99□□□□□ -0.97
SF3B1-211ENST00000487698 OR2A5Q96R48 311 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 PANX1Q96RD7 426 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 C17orf62Q9BQA9 187 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 TRIM15Q9C019 465 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 ATAD3AQ9NVI7 634 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 HRASLS2Q9NWW9 162 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 MUC3AQ02505 3323 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 A0A0J9YY10 115 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 TCRBV5S2A0A599 114 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 C1orf226A1L170 272 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 LILRA5A6NI73 299 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms