RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 C17orf62Q9BQA9 187 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 DCAF13Q9NV06 445 aaKnown RBP11.36□□□□□ -0.59
TRA2B-214ENST00000487615 SAGE1Q9NXZ1 904 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 DUXAA6NLW8 204 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 HIDE1A8MVS5 230 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 ASNA1O43681 348 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 STATHP02808 62 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 RPLP0P05388 317 aaKnown RBP11.36□□□□□ -0.59
TRA2B-214ENST00000487615 ZNF26P17031 533 aaPredicted RBP11.36□□□□□ -0.59
TRA2B-214ENST00000487615 ITGB7P26010 798 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 NUDT6P53370 316 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 UGT3A2Q3SY77 523 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 CHERPQ8IWX8 916 aaKnown RBP11.36□□□□□ -0.59
TRA2B-214ENST00000487615 PEX5LQ8IYB4 626 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 C9orf43Q8TAL5 461 aaPredicted RBP11.36□□□□□ -0.59
TRA2B-214ENST00000487615 METTL2AQ96IZ6 378 aaKnown RBP11.36□□□□□ -0.59
TRA2B-214ENST00000487615 CAMK1GQ96NX5 476 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 MAPKAP1Q9BPZ7 522 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 DPEP2Q9H4A9 486 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 KLHL1Q9NR64 748 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 TVP23BQ9NYZ1 205 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 DNMT3BQ9UBC3 853 aaKnown RBP11.36□□□□□ -0.59
TRA2B-214ENST00000487615 B3GALT2O43825 422 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 ZNF8P17098 575 aaPredicted RBP11.36□□□□□ -0.59
TRA2B-214ENST00000487615 RUNX3Q13761 415 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 PARGQ86W56 976 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 AQP11Q8NBQ7 271 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 CNIH3Q8TBE1 160 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 FAM110BQ8TC76 370 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 OR5P2Q8WZ92 322 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 DNASE1L2Q92874 299 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 RAB8BQ92930 207 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 TESCQ96BS2 214 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 C1QTNF3Q9BXJ4 246 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 TPK1Q9H3S4 243 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 ZSCAN32Q9NX65 697 aa11.36□□□□□ -0.59
TRA2B-214ENST00000487615 KLHL33A6NCF5 533 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 ALPPP05187 535 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 ZNF12P17014 697 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 RAB8AP61006 207 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 GK3PQ14409 553 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 RSBN1Q5VWQ0 802 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-214ENST00000487615 EGFLAMQ63HQ2 1017 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 EZH1Q92800 747 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-214ENST00000487615 NEIL2Q969S2 332 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 C1GALT1C1Q96EU7 318 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 COX4I2Q96KJ9 171 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 IL4I1Q96RQ9 567 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 KRT87PA6NCN2 255 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 GNAO1P09471 354 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 ALOX5P09917 674 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 GRIA2P42262 883 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 XKP51811 444 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 TMBIM6P55061 237 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 ERVFC1P60507 584 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 STX4Q12846 297 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 SELPLGQ14242 412 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 GGTA1PQ4G0N0 100 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 CRB2Q5IJ48 1285 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 CATSPEREQ5SY80 951 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 CLIP3Q96DZ5 547 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 ZNF419Q96HQ0 510 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-214ENST00000487615 TEX37Q96LM6 180 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 XKR8Q9H6D3 395 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 MAT2BQ9NZL9 334 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 PTGFRNQ9P2B2 879 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 SARDHQ9UL12 918 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 ETFAP13804 333 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 PRLHRP49683 370 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 RPS21P63220 83 aaKnown RBP11.35□□□□□ -0.59
TRA2B-214ENST00000487615 KLHL12Q53G59 568 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 XKR5Q6UX68 686 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 TRIM46Q7Z4K8 759 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 F2RL3Q96RI0 385 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 LMAN2LQ9H0V9 348 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 MIR1-1HGQ9H1L0 117 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 EHD1Q9H4M9 534 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 ADAP2Q9NPF8 381 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 TSC22D4Q9Y3Q8 395 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 TRIM43BA6NCK2 446 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 FAM86C2PA6NEL3 165 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 NUDT14O95848 222 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 CYP17A1P05093 508 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 ZNF182P17025 639 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-214ENST00000487615 FEN1P39748 380 aaKnown RBP11.35□□□□□ -0.59
TRA2B-214ENST00000487615 TOR1AIP1Q5JTV8 583 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 SERPINA11Q86U17 422 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 FAM20CQ8IXL6 584 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 OR4E2Q8NGC2 313 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 ENKURQ8TC29 256 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 ACSL6Q9UKU0 697 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 CLEC4EQ9ULY5 219 aa11.35□□□□□ -0.59
TRA2B-214ENST00000487615 RPL36Q9Y3U8 105 aaKnown RBP11.35□□□□□ -0.59
TRA2B-214ENST00000487615 RTCAO00442 366 aaKnown RBP11.34□□□□□ -0.59
TRA2B-214ENST00000487615 TAPBPO15533 448 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 DNAJB5O75953 348 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 TFAP2AP05549 437 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 CCDC159P0C7I6 412 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 NKX3-2P78367 333 aa11.34□□□□□ -0.59
TRA2B-214ENST00000487615 RPA4Q13156 261 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms