RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ADPRMQ3LIE5 342 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 UNC5DQ6UXZ4 953 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 CCDC71Q8IV32 467 aaPredicted RBP25.06■■□□□ 1.6
HLA-C-208ENST00000487245 OR2L2Q8NH16 312 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 FAM129BQ96TA1 746 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 FBXO8Q9NRD0 319 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 ATAD3AQ9NVI7 634 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 WBP4O75554 376 aaKnown RBP25.05■■□□□ 1.6
HLA-C-208ENST00000487245 POP7O75817 140 aaKnown RBP25.05■■□□□ 1.6
HLA-C-208ENST00000487245 HLA-EP13747 358 aa25.05■■□□□ 1.6
HLA-C-208ENST00000487245 PTX3P26022 381 aaPredicted RBP25.05■■□□□ 1.6
HLA-C-208ENST00000487245 IDUAP35475 653 aa25.05■■□□□ 1.6
HLA-C-208ENST00000487245 METAP1P53582 386 aa25.05■■□□□ 1.6
HLA-C-208ENST00000487245 RPP38P78345 283 aaKnown RBP25.05■■□□□ 1.6
HLA-C-208ENST00000487245 CAMK2GQ13555 558 aaPredicted RBP25.05■■□□□ 1.6
HLA-C-208ENST00000487245 SLBPQ14493 270 aaKnown RBP eCLIP25.05■■□□□ 1.6
HLA-C-208ENST00000487245 SF1Q15637 639 aaKnown RBP25.05■■□□□ 1.6
HLA-C-208ENST00000487245 DGUOKQ16854 277 aa25.05■■□□□ 1.6
HLA-C-208ENST00000487245 MLIPQ5VWP3 458 aa25.05■■□□□ 1.6
HLA-C-208ENST00000487245 TRMT11Q7Z4G4 463 aaKnown RBP25.05■■□□□ 1.6
HLA-C-208ENST00000487245 SLCO6A1Q86UG4 719 aa25.05■■□□□ 1.6
HLA-C-208ENST00000487245 ZNF540Q8NDQ6 660 aa25.05■■□□□ 1.6
HLA-C-208ENST00000487245 PHF10Q8WUB8 498 aaKnown RBP25.05■■□□□ 1.6
HLA-C-208ENST00000487245 REEP4Q9H6H4 257 aa25.05■■□□□ 1.6
HLA-C-208ENST00000487245 PLCXD1Q9NUJ7 323 aa25.05■■□□□ 1.6
HLA-C-208ENST00000487245 TSC22D4Q9Y3Q8 395 aa25.05■■□□□ 1.6
HLA-C-208ENST00000487245 FUOMA2VDF0 154 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 PI15O43692 258 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 MMP20O60882 483 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 NUDT7P0C024 238 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 NR4A1P22736 598 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 FSHRP23945 695 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 KRT20P35900 424 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 SERPINB10P48595 397 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 ZNF763Q0D2J5 394 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 GAB1Q13480 694 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 STARD3Q14849 445 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 UBE2UQ5VVX9 321 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 NXPE4Q6UWF7 544 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 DSG4Q86SJ6 1040 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 TRIM74Q86UV6 250 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 TMCO5AQ8N6Q1 288 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 GPR156Q8NFN8 814 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 PUM2Q8TB72 1066 aaKnown RBP eCLIP25.04■■□□□ 1.6
HLA-C-208ENST00000487245 SLC5A11Q8WWX8 675 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 FAM210AQ96ND0 272 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 DMRT3Q9NQL9 472 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 K7ESM1 405 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 M0R3G1 203 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 GCM2O75603 506 aaPredicted RBP25.04■■□□□ 1.6
HLA-C-208ENST00000487245 FUCA1P04066 466 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 EPHA2P29317 976 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 BCAP31P51572 246 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 RBBP4Q09028 425 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 CATSPEREQ5SY80 951 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 ERN2Q76MJ5 926 aaKnown RBP25.04■■□□□ 1.6
HLA-C-208ENST00000487245 ZBTB46Q86UZ6 589 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 FAM124AQ86V42 546 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 LRRC56Q8IYG6 542 aaPredicted RBP25.04■■□□□ 1.6
HLA-C-208ENST00000487245 DYNC2LI1Q8TCX1 351 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 APH1BQ8WW43 257 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 FCGR1BQ92637 280 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 RAB7BQ96AH8 199 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 TPD52L3Q96J77 140 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 CCDC177Q9NQR7 707 aaPredicted RBP25.04■■□□□ 1.6
HLA-C-208ENST00000487245 CHCHD3Q9NX63 227 aaKnown RBP25.04■■□□□ 1.6
HLA-C-208ENST00000487245 SH3BP4Q9P0V3 963 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 EXO1Q9UQ84 846 aaKnown RBP25.04■■□□□ 1.6
HLA-C-208ENST00000487245 SH3GLB1Q9Y371 365 aa25.04■■□□□ 1.6
HLA-C-208ENST00000487245 OR2A25A4D2G3 310 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 CLDN24A6NM45 220 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 KPNA4O00629 521 aaPredicted RBP25.03■■□□□ 1.6
HLA-C-208ENST00000487245 ACADLP28330 430 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 PIK3CBP42338 1070 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 SELENOWP63302 87 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 TEKQ02763 1124 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 TAP2Q03519 686 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 ITGADQ13349 1161 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 GAB4Q2WGN9 574 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 ADNP2Q6IQ32 1131 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 TSEN54Q7Z6J9 526 aaKnown RBP25.03■■□□□ 1.6
HLA-C-208ENST00000487245 RBM12BQ8IXT5 1001 aaKnown RBP25.03■■□□□ 1.6
HLA-C-208ENST00000487245 OR4A15Q8NGL6 344 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 CXorf40AQ8TE69 158 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 TMEM245Q9H330 911 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 ANKHQ9HCJ1 492 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 AASSQ9UDR5 926 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 LRRK1Q38SD2 2015 aa25.03■■□□□ 1.6
HLA-C-208ENST00000487245 PIPSLA2A3N6 862 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 A8MVJ9 347 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 C1QTNF3-AMACRE9PGA6 284 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 ADAMDEC1O15204 470 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 ZNF8P17098 575 aaPredicted RBP25.02■■□□□ 1.6
HLA-C-208ENST00000487245 MVDP53602 400 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 RPA4Q13156 261 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 ZNF234Q14588 700 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 FAM78AQ5JUQ0 283 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 ENTHD1Q8IYW4 607 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 MINDY2Q8NBR6 621 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 MROQ9BYG7 248 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms