RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 PTAR1Q7Z6K3 402 aaPredicted RBP6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 TRIM74Q86UV6 250 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 HEATR4Q86WZ0 1026 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 SLC25A45Q8N413 288 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 SAP25Q8TEE9 199 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 SKA1Q96BD8 255 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 SDCCAG3Q96C92 435 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 COX14Q96I36 57 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 FAR2Q96K12 515 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 ZNF778Q96MU6 729 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 CAMK1GQ96NX5 476 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 PPP1R2P1Q96PQ5 205 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 KRT12Q99456 494 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 TRABDQ9H4I3 376 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 CHODLQ9H9P2 273 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 TMEM9BQ9NQ34 198 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 MRPL40Q9NQ50 206 aaKnown RBP6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 GDF3Q9NR23 364 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 PKD2L2Q9NZM6 624 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 HACD3Q9P035 362 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 KCND3Q9UK17 655 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 RAB21Q9UL25 225 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 PCYT1BQ9Y5K3 369 aaPredicted RBP6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 PCDH15Q96QU1 1955 aa6.04□□□□□ -1.44
RTFDC1-209ENST00000487211 ASCC3Q8N3C0 2202 aaKnown RBP6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 LOC105369274A0A096LPK9 316 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 LOC102723532A0A0G2JNH3 316 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 C2orf81A6NN90 581 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 ERI2A8K979 691 aaKnown RBP6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 GOLGA8MH3BSY2 632 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 CCDC188H7C350 402 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 CCL22O00626 93 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 STX7O15400 261 aaKnown RBP6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 TTI1O43156 1089 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 SH3BP5O60239 455 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 DFNA5O60443 496 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 PRAMEF2O60811 474 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 SDC3O75056 442 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 MTX2O75431 263 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 TMEM63AO94886 807 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 TK1P04183 234 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 TUBB4AP04350 444 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 ZNF883P0CG24 379 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 PRSS56P0CW18 603 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 CKMT1AP12532 417 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 TNFRSF1AP19438 455 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 TPSB2P20231 275 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 DRD4P21917 467 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 DGKAP23743 735 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 PSMA3P25788 255 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 CNTFP26441 200 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 TEAD1P28347 426 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 TNNT3P45378 269 aaPredicted RBP6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 NPY2RP49146 381 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 LMAN1P49257 510 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 THOP1P52888 689 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 LIMK1P53667 647 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 ATXN3P54252 364 aaPredicted RBP6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 KIAA1024LP59773 190 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 DCDC1P59894 354 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 SRP54P61011 504 aaKnown RBP6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 CRADDP78560 199 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 ARHGAP8P85298 464 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 DR1Q01658 176 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 PPARDQ03181 441 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 C2orf54Q08AI8 447 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 CDH17Q12864 832 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 C1orf61Q13536 156 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 PEX6Q13608 980 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 PTK6Q13882 451 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 PPP1R7Q15435 360 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 TRADDQ15628 312 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 TPSAB1Q15661 275 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 CHRNA6Q15825 494 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 ZXDCQ2QGD7 858 aaPredicted RBP6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 ALG11Q2TAA5 492 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 ATP13A5Q4VNC0 1218 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 RNASE12Q5GAN4 147 aaKnown RBP6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 TSTD2Q5T7W7 516 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 LRRC8BQ6P9F7 803 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 C16orf89Q6UX73 402 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 PPP1R21Q6ZMI0 780 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 MACC1Q6ZN28 852 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 Q6ZPA2 131 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 RINLQ6ZS11 566 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 RD3Q7Z3Z2 195 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 PIP4P1Q86T03 277 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 LINC00523Q86TU6 105 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 RBFAQ8N0V3 343 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 OR4N4Q8N0Y3 316 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 TRAM1L1Q8N609 369 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 NAT8LQ8N9F0 302 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 DNAAF3Q8N9W5 541 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 OR56A4Q8NGH8 313 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 CCL4L1Q8NHW4 92 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 DTX3LQ8TDB6 740 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 GRK7Q8WTQ7 553 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 OR1E3Q8WZA6 343 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 NPIPB3Q92617 1050 aa6.03□□□□□ -1.44
RTFDC1-209ENST00000487211 CDKN2AIPNLQ96HQ2 116 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms