RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CD48P09326 243 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 HMOX1P09601 288 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 CD59P13987 128 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 CTNNB1P35222 781 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 SERPINB6P35237 376 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 TIMP3P35625 211 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 MAGEB1P43366 347 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 IER3P46695 156 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 DNA2P51530 1060 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 ACTN3Q08043 901 aaPredicted RBP4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 RUSC1-AS1Q66K80 236 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 ZNF770Q6IQ21 691 aaPredicted RBP4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 TMEM207Q6UWW9 146 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 CPEB2Q7Z5Q1 589 aaKnown RBP4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 GPR141Q7Z602 305 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 NR2C2APQ86WQ0 139 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 SIAH3Q8IW03 269 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 OR2T11Q8NH01 316 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 MGARPQ8TDB4 240 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 CKAP2Q8WWK9 683 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 GIMAP5Q96F15 307 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 TSSK2Q96PF2 358 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 UHRF2Q96PU4 802 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 BTBD9Q96Q07 612 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 PI4K2AQ9BTU6 479 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 FAM49AQ9H0Q0 323 aaPredicted RBP4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 THAP2Q9H0W7 228 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 UBQLN3Q9H347 655 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 SDF2L1Q9HCN8 221 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 SLC52A3Q9NQ40 469 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 PPANQ9NQ55 473 aaKnown RBP4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 C19orf25Q9UFG5 118 aaPredicted RBP4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 ZNF580Q9UK33 172 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 ICAM5Q9UMF0 924 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 PROCRQ9UNN8 238 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 ITM2BQ9Y287 266 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 MYH14Q7Z406 1995 aaKnown RBP4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 STK36Q9NRP7 1315 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 WDR81Q562E7 1941 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 ADCY9O60503 1353 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 ABCC6O95255 1503 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 ARID2Q68CP9 1835 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 TAF1LQ8IZX4 1826 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 PCNTO95613 3336 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 IFITM10A6NMD0 228 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 E5RGE8 158 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 H3BMM5 538 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 BCL9O00512 1426 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 EXTL3O43909 919 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 ATP9AO75110 1047 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 RTN2O75298 545 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 TRMUO75648 421 aaKnown RBP4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 AKAP3O75969 853 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 GLCEO94923 617 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 NADKO95544 446 aaPredicted RBP4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 BAG2O95816 211 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 CLPTM1O96005 669 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 ATP1B1P05026 303 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 FAM157CP0CG43 387 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 VCLP18206 1134 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 CASP3P42574 277 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 LBX1P52954 281 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 MYL7Q01449 175 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 AKAP17AQ02040 695 aaKnown RBP4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 UBXN1Q04323 297 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 AP1B1Q10567 949 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 GTDC1Q4AE62 458 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 C18orf65Q6ZTR6 163 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 PRUNE1Q86TP1 453 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 MARVELD2Q8N4S9 558 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 GBP7Q8N8V2 638 aaPredicted RBP4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 TRIM58Q8NG06 486 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 SNX21Q969T3 373 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 PDLIM5Q96HC4 596 aaKnown RBP4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 PANX3Q96QZ0 392 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 ZNF559Q9BR84 538 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 ALKBH7Q9BT30 221 aaPredicted RBP4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 CUEDC2Q9H467 287 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 ATP13A3Q9H7F0 1226 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 C10orf88Q9H8K7 445 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 MID1IP1Q9NPA3 183 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 PDRG1Q9NUG6 133 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 OR6C2Q9NZP2 312 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 MAN1B1Q9UKM7 699 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 STX8Q9UNK0 236 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 AGTPBP1Q9UPW5 1226 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 PPP2R2CQ9Y2T4 447 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 NSG2Q9Y328 171 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 C2CD2Q9Y426 696 aa4.42□□□□□ -1.7
PRPF38A-203ENST00000487160 C5P01031 1676 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 USP54Q70EL1 1684 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 SLIT3O75094 1523 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 PKD1L3Q7Z443 1732 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 C13orf42A0A1B0GVH6 325 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 EME2A4GXA9 379 aaPredicted RBP4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 H0YIG0 161 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 KLF11O14901 512 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 ACSL4O60488 711 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 GOT1P17174 413 aa4.41□□□□□ -1.7
PRPF38A-203ENST00000487160 MAP2K2P36507 400 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms