RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 CD1DP15813 335 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 STX2P32856 288 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 GDF5P43026 501 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 RAB10P61026 200 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 CKAP4Q07065 602 aaKnown RBP13.56□□□□□ -0.24
CLDN11-207ENST00000486975 ELOAQ14241 798 aaKnown RBP13.56□□□□□ -0.24
CLDN11-207ENST00000486975 NSDHLQ15738 373 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 BTBD16Q32M84 506 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 KBTBD12Q3ZCT8 623 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 GRTP1Q5TC63 336 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 FAM180AQ6UWF9 173 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 CTAGE6Q86UF2 777 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 GPSM1Q86YR5 675 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 PDPRQ8NCN5 879 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 OR1N1Q8NGS0 311 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 PRR7Q8TB68 274 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 M1APQ8TC57 530 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 KIAA1191Q96A73 305 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 LPAR4Q99677 370 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 TMEM79Q9BSE2 394 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 CNOT10Q9H9A5 744 aaKnown RBP13.56□□□□□ -0.24
CLDN11-207ENST00000486975 MMP25Q9NPA2 562 aa13.56□□□□□ -0.24
CLDN11-207ENST00000486975 CPAMD8Q8IZJ3 1885 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 COL12A1Q99715 3063 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 OR5H15A6NDH6 313 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 OR2W5A6NFC9 320 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 CDK2AP1O14519 115 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 TAPBPO15533 448 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 H2AFYO75367 372 aaKnown RBP13.55□□□□□ -0.24
CLDN11-207ENST00000486975 WDPCPO95876 746 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 RNH1P13489 461 aaKnown RBP13.55□□□□□ -0.24
CLDN11-207ENST00000486975 MAGEA4P43358 317 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 STXBP1P61764 594 aaKnown RBP13.55□□□□□ -0.24
CLDN11-207ENST00000486975 GUCY2DQ02846 1103 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 RBBP5Q15291 538 aaKnown RBP13.55□□□□□ -0.24
CLDN11-207ENST00000486975 SFT2D3Q587I9 215 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 ZNF324BQ6AW86 544 aaPredicted RBP13.55□□□□□ -0.24
CLDN11-207ENST00000486975 SULT1C3Q6IMI6 304 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 PAPD4Q6PIY7 484 aaKnown RBP13.55□□□□□ -0.24
CLDN11-207ENST00000486975 TMIGD1Q6UXZ0 262 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 QSOX2Q6ZRP7 698 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 CTAGE3PQ8IX95 158 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 LGI4Q8N135 537 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 BCORP1Q8N888 145 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 TSLPQ969D9 159 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 GAL3ST3Q96A11 431 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 WDR34Q96EX3 536 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 ZNF354BQ96LW1 612 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 RBCK1Q9BYM8 510 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 DNAJC11Q9NVH1 559 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 PLA2G3Q9NZ20 509 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 WWOXQ9NZC7 414 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 SLC5A6Q9Y289 635 aa13.55□□□□□ -0.24
CLDN11-207ENST00000486975 IGKV3D-11A0A0A0MRZ8 115 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 CLEC3AO75596 197 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 STK16O75716 305 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 CDC123O75794 336 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-207ENST00000486975 MYBL2P10244 700 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 HPDP32754 393 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-207ENST00000486975 OR4D2P58180 307 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 RAB8AP61006 207 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 ZNF33BQ06732 778 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 E2F2Q14209 437 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 SLBPQ14493 270 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLDN11-207ENST00000486975 OR4D1Q15615 310 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 TRADDQ15628 312 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 C18orf21Q32NC0 220 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-207ENST00000486975 ADPRMQ3LIE5 342 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 ACER2Q5QJU3 275 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 CCDC91Q7Z6B0 441 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 CCDC25Q86WR0 208 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLDN11-207ENST00000486975 KRT78Q8N1N4 520 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 SPATA6LQ8N4H0 392 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 PPM1NQ8N819 430 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 AICDAQ9GZX7 198 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 KLHL31Q9H511 634 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 OLAHQ9NV23 265 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 STMN3Q9NZ72 180 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 ERRFI1Q9UJM3 462 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-207ENST00000486975 PTBP2Q9UKA9 531 aaKnown RBP13.54□□□□□ -0.24
CLDN11-207ENST00000486975 PCDHGB6Q9Y5F9 930 aa13.54□□□□□ -0.24
CLDN11-207ENST00000486975 ICE1Q9Y2F5 2266 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 TCRBV16S1A1N1A0A5B0 115 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 CCDC189A1A4V9 331 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 NCF1BA6NI72 391 aaPredicted RBP13.53□□□□□ -0.24
CLDN11-207ENST00000486975 NCF1CA8MVU1 366 aaPredicted RBP13.53□□□□□ -0.24
CLDN11-207ENST00000486975 C4orf51C9J302 202 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 PRMT3O60678 531 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 PRAMEF2O60811 474 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 DNAJB6O75190 326 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 B3GALT4O96024 378 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 LDLRP01130 860 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 SLC35E2BP0CK96 405 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 RNF224P0DH78 156 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 NCF1P14598 390 aaPredicted RBP13.53□□□□□ -0.24
CLDN11-207ENST00000486975 CRABP2P29373 138 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 MMP16P51512 607 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 SLC26A5P58743 744 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 OLR1P78380 273 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms