RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 KRT15P19012 456 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 TAC1P20366 129 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 CCT5P48643 541 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 PRKAA2P54646 552 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 RRADP55042 308 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 MAT1AQ00266 395 aaKnown RBP12.44□□□□□ -0.42
SF1-216ENST00000486867 KCNAB2Q13303 367 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 SYT16Q17RD7 645 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 CCDC153Q494R4 210 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 DEFB134Q4QY38 66 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 TMEM35AQ53FP2 167 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 TOR1AIP1Q5JTV8 583 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 DCAF10Q5QP82 559 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 ZNF678Q5SXM1 525 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 KIRREL2Q6UWL6 708 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 SLC22A9Q8IVM8 553 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 SHISA5Q8N114 240 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 MYRIPQ8NFW9 859 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 OR52B6Q8NGF0 335 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 WDR20Q8TBZ3 569 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 RDH11Q8TC12 318 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 NSUN5Q96P11 429 aaKnown RBP12.44□□□□□ -0.42
SF1-216ENST00000486867 CRB3Q9BUF7 120 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 NPLQ9BXD5 320 aaPredicted RBP12.44□□□□□ -0.42
SF1-216ENST00000486867 TRIM55Q9BYV6 548 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 ING2Q9H160 280 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 SOX17Q9H6I2 414 aaPredicted RBP12.44□□□□□ -0.42
SF1-216ENST00000486867 C3orf18Q9UK00 162 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 RALYQ9UKM9 306 aaKnown RBP12.44□□□□□ -0.42
SF1-216ENST00000486867 GRID1Q9ULK0 1009 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 PLAAQ9Y263 795 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 ANGPTL3Q9Y5C1 460 aa12.44□□□□□ -0.42
SF1-216ENST00000486867 PCDHGA9Q9Y5G4 932 aaKnown RBP12.44□□□□□ -0.42
SF1-216ENST00000486867 SMG1Q96Q15 3661 aaKnown RBP12.44□□□□□ -0.42
SF1-216ENST00000486867 BSNQ9UPA5 3926 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 CCDC151A5D8V7 595 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 SMIM23A6NLE4 172 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 FOXE1O00358 373 aaPredicted RBP12.43□□□□□ -0.42
SF1-216ENST00000486867 CLDN9O95484 217 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 SERPIND1P05546 499 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 KRT4P19013 534 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 IMPDH1P20839 514 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 OTX2P32243 289 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 XCR1P46094 333 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 EMP2P54851 167 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 NAA20P61599 178 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 TUBB8Q3ZCM7 444 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 UNC50Q53HI1 259 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 TNFAIP8L3Q5GJ75 292 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 DEPDC1Q5TB30 811 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 CPZQ66K79 652 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 ABHD17CQ6PCB6 329 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 ZYG11AQ6WRX3 759 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 UBE3DQ7Z6J8 389 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 BANPQ8N9N5 519 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 PLPP5Q8NEB5 264 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 SRFBP1Q8NEF9 429 aaKnown RBP12.43□□□□□ -0.42
SF1-216ENST00000486867 OR11G2Q8NGC1 345 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 CCDC126Q96EE4 140 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 MAGEB10Q96LZ2 347 aaPredicted RBP12.43□□□□□ -0.42
SF1-216ENST00000486867 FER1L6-AS2Q96M78 137 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 TMEM237Q96Q45 408 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 SEMA4CQ9C0C4 833 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 VN1R1Q9GZP7 353 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 REXO4Q9GZR2 422 aaKnown RBP12.43□□□□□ -0.42
SF1-216ENST00000486867 NOL11Q9H8H0 719 aaKnown RBP12.43□□□□□ -0.42
SF1-216ENST00000486867 ACTR8Q9H981 624 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 DMRT3Q9NQL9 472 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 PRDM7Q9NQW5 492 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 ZNF225Q9UK10 706 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 RNF11Q9Y3C5 154 aa12.43□□□□□ -0.42
SF1-216ENST00000486867 A0A1B0GTL3 188 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 ZNF860A6NHJ4 632 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 ARGFXA6NJG6 315 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 PEX12O00623 359 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 FFAR3O14843 346 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 GPR42O15529 346 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 ERI3O43414 337 aaKnown RBP12.42□□□□□ -0.42
SF1-216ENST00000486867 CHST10O43529 356 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 DNAJB6O75190 326 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 C1QL1O75973 258 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 B3GALT4O96024 378 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 OTCP00480 354 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 TSFMP43897 325 aaKnown RBP12.42□□□□□ -0.42
SF1-216ENST00000486867 DNAJB13P59910 316 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 RAB8AP61006 207 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 RHAGQ02094 409 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 ZNF844Q08AG5 666 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 IFFO1Q0D2I5 559 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 LY6DQ14210 128 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 RBBP7Q16576 425 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 TCTN3Q6NUS6 607 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 SHISA6Q6ZSJ9 500 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 OR5T3Q8NGG3 340 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 HUS1BQ8NHY5 278 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 TBC1D20Q96BZ9 403 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 REPS1Q96D71 796 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 CMTM7Q96FZ5 175 aa12.42□□□□□ -0.42
SF1-216ENST00000486867 APOPT1Q96IL0 206 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms