RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 FNDC8Q8TC99 324 aa17.24■□□□□ 0.35
PDLIM7-207ENST00000486828 LZICQ8WZA0 190 aa17.24■□□□□ 0.35
PDLIM7-207ENST00000486828 ITFG2Q969R8 447 aa17.24■□□□□ 0.35
PDLIM7-207ENST00000486828 UBE2E3Q969T4 207 aa17.24■□□□□ 0.35
PDLIM7-207ENST00000486828 MTERF3Q96E29 417 aa17.24■□□□□ 0.35
PDLIM7-207ENST00000486828 ZFYVE19Q96K21 471 aa17.24■□□□□ 0.35
PDLIM7-207ENST00000486828 MYOCQ99972 504 aa17.24■□□□□ 0.35
PDLIM7-207ENST00000486828 SCN3BQ9NY72 215 aa17.24■□□□□ 0.35
PDLIM7-207ENST00000486828 ERVK-18Q9QC07 812 aa17.24■□□□□ 0.35
PDLIM7-207ENST00000486828 DPP7Q9UHL4 492 aa17.24■□□□□ 0.35
PDLIM7-207ENST00000486828 PCDHGB3Q9Y5G1 929 aa17.24■□□□□ 0.35
PDLIM7-207ENST00000486828 TCF20Q9UGU0 1960 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-207ENST00000486828 RRM2P31350 389 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 TAS2R50P59544 299 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 ZNF234Q14588 700 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 MAD2L1BPQ15013 274 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 NPTX1Q15818 432 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 MPEG1Q2M385 716 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 PRAMEF14Q5SWL7 426 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 GCNT6Q5T4J0 391 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 PRAMEF13Q5VWM6 474 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 FAM109BQ6ICB4 259 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 FAM83HQ6ZRV2 1179 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 ERN2Q76MJ5 926 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 TSEN54Q7Z6J9 526 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 C11orf96Q7Z7L8 435 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 CIDECQ96AQ7 238 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 HSPBAP1Q96EW2 488 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 OR52A5Q9H2C5 316 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 RUBCNLQ9H714 662 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 DYRK4Q9NR20 520 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 AASSQ9UDR5 926 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 OTOL1A6NHN0 477 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 C5orf67F2Z3F1 127 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 EPHA2P29317 976 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 NPRL3Q12980 569 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 FADDQ13158 208 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 CAMK2GQ13555 558 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 ELOAQ14241 798 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 LCTLQ6UWM7 567 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.23■□□□□ 0.351e-6■□□□□ 9
PDLIM7-207ENST00000486828 SMG7Q92540 1137 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 IL17FQ96PD4 163 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 GABARAPL3Q9BY60 117 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 TMEM245Q9H330 911 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 RAD21L1Q9H4I0 556 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 TMEM38AQ9H6F2 299 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 PCDHGA10Q9Y5H3 936 aa17.23■□□□□ 0.35
PDLIM7-207ENST00000486828 hCG_2014768A0A024R1R8 64 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 HEPACAM2A8MVW5 462 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 GRXCR1A8MXD5 290 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 MRPS14O60783 128 aaKnown RBP17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 BCAS1O75363 584 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 KLK1P06870 262 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 CD6P30203 668 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 AQP6Q13520 282 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 SCARB2Q14108 478 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 IER5LQ5T953 404 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 IKBIPQ70UQ0 350 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 PDZD3Q86UT5 571 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 FAM124AQ86V42 546 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 OXR1Q8N573 874 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 ZNF740Q8NDX6 193 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 SPPL2AQ8TCT8 520 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 CXorf40AQ8TE69 158 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 RORBQ92753 470 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 RAD51AP1Q96B01 352 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 FAM210AQ96ND0 272 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 GALNT8Q9NY28 637 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 NDUFAF4Q9P032 175 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 SPASTQ9UBP0 616 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 ASF1AQ9Y294 204 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 CDH23Q9H251 3354 aa17.22■□□□□ 0.35
PDLIM7-207ENST00000486828 ADAMDEC1O15204 470 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 CLPXO76031 633 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 RB1P06400 928 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 KELP23276 732 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 PTX3P26022 381 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 ACVR2AP27037 513 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 CASP9P55211 416 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 RPP38P78345 283 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 RPA4Q13156 261 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 SPCS2Q15005 226 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 IFI44LQ53G44 452 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 FAM78AQ5JUQ0 283 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 TRIM40Q6P9F5 258 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 TMIGD1Q6UXZ0 262 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 CCDC80Q76M96 950 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 VN1R5Q7Z5H4 357 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 CCDC71Q8IV32 467 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 COX14Q96I36 57 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 ZNF347Q96SE7 839 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 BCL7BQ9BQE9 202 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 CCNB1IP1Q9NPC3 277 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 C1GALT1Q9NS00 363 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 TBC1D23Q9NUY8 699 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 TAS2R9Q9NYW1 312 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 PCYT1BQ9Y5K3 369 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 LYVE1Q9Y5Y7 322 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 TNFRSF11BO00300 401 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms