RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 PMP22Q01453 160 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 SRSF9Q13242 221 aaKnown RBP eCLIP3.99□□□□□ -1.77
SMC4-218ENST00000486711 CDH18Q13634 790 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 EFTUD2Q15029 972 aaKnown RBP eCLIP3.99□□□□□ -1.77
SMC4-218ENST00000486711 C14orf177Q52M58 125 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 SLC27A4Q6P1M0 643 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 FIP1L1Q6UN15 594 aaKnown RBP3.99□□□□□ -1.77
SMC4-218ENST00000486711 BTN2A1Q7KYR7 527 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 CHMP1BQ7LBR1 199 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 ASPGQ86U10 573 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 TDHQ8IZJ6 230 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 OR4D10Q8NGI6 311 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 SMAP2Q8WU79 429 aaPredicted RBP3.99□□□□□ -1.77
SMC4-218ENST00000486711 GATAD1Q8WUU5 269 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 TMEM190Q8WZ59 177 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 SEPT8Q92599 483 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 GGHQ92820 318 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 ZNF501Q96CX3 271 aaPredicted RBP3.99□□□□□ -1.77
SMC4-218ENST00000486711 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 LRR1Q96L50 414 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 NEDD4LQ96PU5 975 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 ATP6V0BQ99437 205 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 UBAC1Q9BSL1 405 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 LRRC2Q9BYS8 371 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 MTIF3Q9H2K0 278 aaKnown RBP3.99□□□□□ -1.77
SMC4-218ENST00000486711 DBF4Q9UBU7 674 aaPredicted RBP3.99□□□□□ -1.77
SMC4-218ENST00000486711 POMT2Q9UKY4 750 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 EXOC6BQ9Y2D4 811 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 TMED7Q9Y3B3 224 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 SMCHD1A6NHR9 2005 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 MTMR11A4FU01 709 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 ZNF195O14628 629 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 ZBTB14O43829 449 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 SAP30O75446 220 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 OLFM2O95897 454 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 TBX6O95947 436 aaPredicted RBP3.98□□□□□ -1.77
SMC4-218ENST00000486711 CEBPBP17676 345 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 SMSP52788 366 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 OR1D5P58170 312 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 GUCY2DQ02846 1103 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 GRB14Q14449 540 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 LASP1Q14847 261 aaKnown RBP3.98□□□□□ -1.77
SMC4-218ENST00000486711 DUSP5Q16690 384 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 ATP1A1-AS1Q5TC04 95 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 TCEAL6Q6IPX3 200 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 TRMT11Q7Z4G4 463 aaKnown RBP3.98□□□□□ -1.77
SMC4-218ENST00000486711 PTAR1Q7Z6K3 402 aaPredicted RBP3.98□□□□□ -1.77
SMC4-218ENST00000486711 SFRP1Q8N474 314 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 FAM76AQ8TAV0 307 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 CHURC1Q8WUH1 139 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 AZIN2Q96A70 460 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 OMA1Q96E52 524 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 DDX50Q9BQ39 737 aaKnown RBP3.98□□□□□ -1.77
SMC4-218ENST00000486711 BARHL1Q9BZE3 327 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 WDR13Q9H1Z4 485 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 MAGEF1Q9HAY2 307 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 PNPLA3Q9NST1 481 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 DNAJC11Q9NVH1 559 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 HMG20BQ9P0W2 317 aa3.98□□□□□ -1.77
SMC4-218ENST00000486711 RNF123Q5XPI4 1314 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 A0A087WZ39 114 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 A0A1B0GU03 582 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 NKX6-3A6NJ46 265 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 ZNF732B4DXR9 585 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 TCP10L2B9ZVM9 353 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 H0YIG0 161 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 MAGEC1O60732 1142 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 GSTA2P09210 222 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 ZNF883P0CG24 379 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 HLA-FP30511 346 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 TSFMP43897 325 aaKnown RBP3.97□□□□□ -1.77
SMC4-218ENST00000486711 LEPRP48357 1165 aaKnown RBP3.97□□□□□ -1.77
SMC4-218ENST00000486711 ADARP55265 1226 aaKnown RBP3.97□□□□□ -1.77
SMC4-218ENST00000486711 XGP55808 180 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 UCP2P55851 309 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 GNB1P62873 340 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 GFPT1Q06210 699 aaPredicted RBP3.97□□□□□ -1.77
SMC4-218ENST00000486711 TAB1Q15750 504 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 LRRC37A5PQ49AS3 106 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 PWWP2BQ6NUJ5 590 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 PLBD1Q6P4A8 553 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 Q6ZSR9 355 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 RFPL4BQ6ZWI9 263 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 MYPOPQ86VE0 399 aaPredicted RBP3.97□□□□□ -1.77
SMC4-218ENST00000486711 LAX1Q8IWV1 398 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 CNTN4Q8IWV2 1026 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 SPEM1Q8N4L4 309 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 TEX26Q8N6G2 289 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 RTL3Q8N8U3 475 aaKnown RBP3.97□□□□□ -1.77
SMC4-218ENST00000486711 CASP10Q92851 521 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 ZNF486Q96H40 463 aaPredicted RBP3.97□□□□□ -1.77
SMC4-218ENST00000486711 GMPPAQ96IJ6 420 aaPredicted RBP3.97□□□□□ -1.77
SMC4-218ENST00000486711 PCDHB18PQ96TA0 734 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 PIGQQ9BRB3 760 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 FAM213AQ9BRX8 229 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 CLEC7AQ9BXN2 247 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 ACPTQ9BZG2 426 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 TRIM7Q9C029 511 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 VIPAS39Q9H9C1 493 aa3.97□□□□□ -1.77
SMC4-218ENST00000486711 C3orf14Q9HBI5 128 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms