RNA–Protein interactions for RNA: ENST00000486560.1

GSDMB-210, Transcript of gasdermin B, humanhuman

TSL 3

Gene GSDMB, Length 318 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-210ENST00000486560 SEC24DO94855 1032 aaPredicted RBP11.32□□□□□ -0.6
GSDMB-210ENST00000486560 BMP10O95393 424 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 PDGFAP04085 211 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 ALPPP05187 535 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 RNH1P13489 461 aaKnown RBP11.32□□□□□ -0.6
GSDMB-210ENST00000486560 MTHFD2P13995 350 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 TSPAN8P19075 237 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 CD22P20273 847 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 JAK1P23458 1154 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 HSD17B3P37058 310 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 TGM3Q08188 693 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 ABRAXAS2Q15018 415 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 SGO1Q5FBB7 561 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 PRAMEF9Q5VWM5 478 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 TCTN3Q6NUS6 607 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 NIPAL1Q6NVV3 410 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 KIRREL2Q6UWL6 708 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 RNF175Q8N4F7 328 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 ARHGEF39Q8N4T4 335 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 EIF1ADQ8N9N8 165 aaKnown RBP11.32□□□□□ -0.6
GSDMB-210ENST00000486560 FAM47BQ8NA70 645 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 ZBTB9Q96C00 473 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 CNDP1Q96KN2 507 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 GPR78Q96P69 363 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 MTERF1Q99551 399 aaKnown RBP11.32□□□□□ -0.6
GSDMB-210ENST00000486560 CENPKQ9BS16 269 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 SLC6A16Q9GZN6 736 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 REXO4Q9GZR2 422 aaKnown RBP11.32□□□□□ -0.6
GSDMB-210ENST00000486560 EPB41L4BQ9H329 900 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 EHD1Q9H4M9 534 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 C19orf25Q9UFG5 118 aaPredicted RBP11.32□□□□□ -0.6
GSDMB-210ENST00000486560 TMCO1Q9UM00 188 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 ATRXP46100 2492 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 IGSF10Q6WRI0 2623 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 NBEAQ8NFP9 2946 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 COL6A6A6NMZ7 2263 aa11.32□□□□□ -0.6
GSDMB-210ENST00000486560 IGLV3-12A0A075B6K2 115 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 A8MT66 165 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 A8MUA0 341 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 DNAJB6O75190 326 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 CLEC3AO75596 197 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 WFS1O76024 890 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 SUPT7LO94864 414 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 ONECUT2O95948 504 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 HPP00738 406 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 FHP07954 510 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 EPORP19235 508 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 CERS1P27544 350 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 DEKP35659 375 aaKnown RBP11.31□□□□□ -0.6
GSDMB-210ENST00000486560 SSR2P43308 183 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 MAGEA12P43365 314 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 KLRB1Q12918 225 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 NAA30Q147X3 362 aaPredicted RBP11.31□□□□□ -0.6
GSDMB-210ENST00000486560 PCBP2Q15366 365 aaKnown RBP eCLIP11.31□□□□□ -0.6
GSDMB-210ENST00000486560 NSDHLQ15738 373 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 BTBD16Q32M84 506 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 VWA5B1Q5TIE3 1220 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 GRHL2Q6ISB3 625 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 ATG14Q6ZNE5 492 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 LINC00696Q6ZRV3 163 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 NDUFAF7Q7L592 441 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 CLNKQ7Z7G1 428 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 KBTBD2Q8IY47 623 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 CA13Q8N1Q1 262 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 SIRT6Q8N6T7 355 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 EFCAB3Q8N7B9 438 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 CREB3L4Q8TEY5 395 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.31□□□□□ -0.6
GSDMB-210ENST00000486560 TSLPQ969D9 159 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 ISL2Q96A47 359 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 TBC1D20Q96BZ9 403 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 REPS1Q96D71 796 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 MS4A6EQ96DS6 147 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 PTCHD1Q96NR3 888 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 NSUN5Q96P11 429 aaKnown RBP11.31□□□□□ -0.6
GSDMB-210ENST00000486560 SARGQ9BW04 601 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 PITHD1Q9GZP4 211 aaPredicted RBP11.31□□□□□ -0.6
GSDMB-210ENST00000486560 IQCGQ9H095 443 aaKnown RBP11.31□□□□□ -0.6
GSDMB-210ENST00000486560 NT5DC2Q9H857 520 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 ENAMQ9NRM1 1142 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 RIC8BQ9NVN3 520 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 TMEM216Q9P0N5 145 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 ZNF490Q9ULM2 529 aaPredicted RBP11.31□□□□□ -0.6
GSDMB-210ENST00000486560 RNF11Q9Y3C5 154 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 CHD6Q8TD26 2715 aa11.31□□□□□ -0.6
GSDMB-210ENST00000486560 MYOCOSA0A1B0GUC4 107 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 CCDC189A1A4V9 331 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 LRIT2A6NDA9 550 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 FAM227AF5H4B4 570 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 RTCAO00442 366 aaKnown RBP11.3□□□□□ -0.6
GSDMB-210ENST00000486560 E2F3O00716 465 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 COPEO14579 308 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 DPM1O60762 260 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 CLDN9O95484 217 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 CELA2AP08217 269 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 COX6A1P12074 109 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 MAOAP21397 527 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 GSTM2P28161 218 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 CSRP3P50461 194 aa11.3□□□□□ -0.6
GSDMB-210ENST00000486560 CDH13P55290 713 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms