RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 SCNM1Q9BWG6 230 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 TRIM15Q9C019 465 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 OR51B5Q9H339 312 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 MRPS30Q9NP92 439 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 TMEM184CQ9NVA4 438 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 NLGN3Q9NZ94 848 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 SPASTQ9UBP0 616 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 APOBEC3BQ9UH17 382 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 WASF3Q9UPY6 502 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 CSNK1G3Q9Y6M4 447 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 TDRD6O60522 2096 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 OR5K4A6NMS3 321 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 SH3BGRLO75368 114 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 SEMA3DO95025 777 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 LRATO95237 230 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 BAG2O95816 211 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 COX7A2P14406 83 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 CKMT2P17540 419 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 SPINK2P20155 84 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 GSTM2P28161 218 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 CMPK1P30085 196 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 GRK3P35626 688 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 HPCAL1P37235 193 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 RPL3P39023 403 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 VHLP40337 213 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 SLC19A1P41440 591 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 CSNK1G2P78368 415 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 LIPEQ05469 1076 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 ZNF763Q0D2J5 394 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 RABL3Q5HYI8 236 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 LRIF1Q5T3J3 769 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 LRRC74BQ6ZQY2 392 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 COMMD6Q7Z4G1 85 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 VN1R5Q7Z5H4 357 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 ADCK2Q7Z695 626 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 TRIM48Q8IWZ4 208 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 TBC1D19Q8N5T2 526 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 OR8J2Q8NGG1 315 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 SLC22A18Q96BI1 424 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 RSRC1Q96IZ7 334 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 ANKRD27Q96NW4 1050 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 KCTD14Q9BQ13 255 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 TCEAL2Q9H3H9 227 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 FAM120CQ9NX05 1096 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 MCM8Q9UJA3 840 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 MDC1Q14676 2089 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 A0A096LPI6 279 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 PRAMEF33A0A0G2JMD5 474 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 TRBC2A0A5B9 178 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 SCAMP2O15127 329 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 AKAP10O43572 662 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 C8BP07358 591 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 GIMD1P0DJR0 217 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 CTSEP14091 401 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 HTR1EP28566 365 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 GSK3BP49841 420 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 PHC1P78364 1004 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 MRPS22P82650 360 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 RHDQ02161 417 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 LRRC74AQ0VAA2 488 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 C1orf61Q13536 156 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 SF1Q15637 639 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 UGT8Q16880 541 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 PROX2Q3B8N5 592 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 DEPDC1Q5TB30 811 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 KHDRBS2Q5VWX1 349 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 IYDQ6PHW0 289 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 CAMKMTQ7Z624 323 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 SLC9B2Q86UD5 537 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 PTRH1Q86Y79 214 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 TMEM132CQ8N3T6 1108 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 ANKRD53Q8N9V6 530 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 OR2L3Q8NG85 312 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 CDC26Q8NHZ8 85 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 GFM2Q969S9 779 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 CENPKQ9BS16 269 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 MS4A8Q9BY19 250 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 REXO4Q9GZR2 422 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 POT1Q9NUX5 634 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 VAPAQ9P0L0 249 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 ACTR3BQ9P1U1 418 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 PCDHGA1Q9Y5H4 931 aa13.94□□□□□ -0.18
POLR2J3-204ENST00000486319 KIR2DS5A0A0G2JLQ3 304 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 A0A0G2JNG1 304 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 AQP12BA6NM10 295 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 ISM1B1AKI9 464 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 H3BNX3 289 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 KIR2DS3K7RE56 304 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 OR1F1O43749 312 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 CLEC3AO75596 197 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 DKK1O94907 266 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 CHRM5P08912 532 aaPredicted RBP13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 TRPC1P48995 793 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 DAB2P98082 770 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 PLIN5Q00G26 463 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 KIR2DS5Q14953 304 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 ELOCQ15369 112 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 TCEA2Q15560 299 aa13.93□□□□□ -0.18
POLR2J3-204ENST00000486319 HKDC1Q2TB90 917 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms