RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 FAM117AQ9C073 453 aa18.9■□□□□ 0.62
COL6A2-208ENST00000485591 BRF2Q9HAW0 419 aa18.9■□□□□ 0.62
COL6A2-208ENST00000485591 SLC22A11Q9NSA0 550 aa18.9■□□□□ 0.62
COL6A2-208ENST00000485591 FARSBQ9NSD9 589 aaKnown RBP18.9■□□□□ 0.62
COL6A2-208ENST00000485591 NAALAD2Q9Y3Q0 740 aa18.9■□□□□ 0.62
COL6A2-208ENST00000485591 TIMM22Q9Y584 194 aa18.9■□□□□ 0.62
COL6A2-208ENST00000485591 NUP210LQ5VU65 1888 aa18.9■□□□□ 0.62
COL6A2-208ENST00000485591 SEC16AO15027 2179 aa18.89■□□□□ 0.62
COL6A2-208ENST00000485591 LOC101059948A0A1B0GTJ6 334 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 C21orf140B9A014 251 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 C9J4A7 227 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 TERTO14746 1132 aaKnown RBP18.89■□□□□ 0.61
COL6A2-208ENST00000485591 AZIN1O14977 448 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 ULK1O75385 1050 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 FGF4P08620 206 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 HSD3B1P14060 373 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 CHN1P15882 459 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 FBLP22087 321 aaKnown RBP18.89■□□□□ 0.61
COL6A2-208ENST00000485591 PTX3P26022 381 aaPredicted RBP18.89■□□□□ 0.61
COL6A2-208ENST00000485591 HSD3B2P26439 372 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 OR1D4P47884 311 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 HTR6P50406 440 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 ARFIP1P53367 373 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 RAB8AP61006 207 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 ABCE1P61221 599 aaKnown RBP18.89■□□□□ 0.61
COL6A2-208ENST00000485591 CSTF3Q12996 717 aaKnown RBP18.89■□□□□ 0.61
COL6A2-208ENST00000485591 STX3Q13277 289 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 DEFB134Q4QY38 66 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 SGO1Q5FBB7 561 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 DEPDC1Q5TB30 811 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 ARHGAP40Q5TG30 622 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 ABHD17CQ6PCB6 329 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 ATG14Q6ZNE5 492 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 COX15Q7KZN9 410 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 TRIM42Q8IWZ5 723 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 AMER3Q8N944 861 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 KDF1Q8NAX2 398 aaPredicted RBP18.89■□□□□ 0.61
COL6A2-208ENST00000485591 NAF1Q96HR8 494 aaKnown RBP18.89■□□□□ 0.61
COL6A2-208ENST00000485591 SERPINI1Q99574 410 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 CENPKQ9BS16 269 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 OR51B5Q9H339 312 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 IFT80Q9P2H3 777 aaPredicted RBP18.89■□□□□ 0.61
COL6A2-208ENST00000485591 CROTQ9UKG9 612 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 MAU2Q9Y6X3 613 aa18.89■□□□□ 0.61
COL6A2-208ENST00000485591 A0A088AWK7 358 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 SERTM1A2A2V5 107 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 ITM2AO43736 263 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 SEMA3DO95025 777 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 ETHE1O95571 254 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 HSPA4LO95757 839 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 RAB40ALP0C0E4 278 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 TCN2P20062 427 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 ZNF10P21506 573 aaPredicted RBP18.88■□□□□ 0.61
COL6A2-208ENST00000485591 DLSTP36957 453 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 SLC1A6P48664 564 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 BST1Q10588 318 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 DNASE1L3Q13609 305 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 SLC9A5Q14940 896 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 NCF4Q15080 339 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 KANK2Q63ZY3 851 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 CLEC6AQ6EIG7 209 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 COL26A1Q96A83 441 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 KIAA1143Q96AT1 154 aaPredicted RBP18.88■□□□□ 0.61
COL6A2-208ENST00000485591 FAR2Q96K12 515 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 QRFPRQ96P65 431 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 KCNC2Q96PR1 638 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 SLC26A1Q9H2B4 701 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 MAP4K5Q9Y4K4 846 aa18.88■□□□□ 0.61
COL6A2-208ENST00000485591 SGK494L7N484 410 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 KLF11O14901 512 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 RRP8O43159 456 aaKnown RBP18.87■□□□□ 0.61
COL6A2-208ENST00000485591 SH3BGRLO75368 114 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 RDH16O75452 317 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 LYPLA1O75608 230 aaPredicted RBP18.87■□□□□ 0.61
COL6A2-208ENST00000485591 B3GALT4O96024 378 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 ALBP02768 609 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 TSFMP43897 325 aaKnown RBP18.87■□□□□ 0.61
COL6A2-208ENST00000485591 RAP1GDS1P52306 607 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 PLA2G16P53816 162 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 ABRAXAS2Q15018 415 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 SH2D4BQ5SQS7 431 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 ATG16L1Q676U5 607 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 MRPL14Q6P1L8 145 aaKnown RBP18.87■□□□□ 0.61
COL6A2-208ENST00000485591 RNF165Q6ZSG1 346 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 OVCH1Q7RTY7 1134 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 UBE3DQ7Z6J8 389 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 CLYBLQ8N0X4 340 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 GBP7Q8N8V2 638 aaPredicted RBP18.87■□□□□ 0.61
COL6A2-208ENST00000485591 RGMAQ96B86 450 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 HBEGFQ99075 208 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 TBCDQ9BTW9 1192 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 GPR87Q9BY21 358 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 ROGDIQ9GZN7 287 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 C20orf27Q9GZN8 174 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 MANSC1Q9H8J5 431 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 GPN2Q9H9Y4 310 aaPredicted RBP18.87■□□□□ 0.61
COL6A2-208ENST00000485591 CLK4Q9HAZ1 481 aaKnown RBP18.87■□□□□ 0.61
COL6A2-208ENST00000485591 PRDM7Q9NQW5 492 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 INTS9Q9NV88 658 aaKnown RBP18.87■□□□□ 0.61
COL6A2-208ENST00000485591 GPN3Q9UHW5 284 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms