RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 CNPY4Q8N129 248 aa18.08■□□□□ 0.48
SNX17-206ENST00000484886 TEX19Q8NA77 164 aa18.08■□□□□ 0.48
SNX17-206ENST00000484886 ATP6V1E2Q96A05 226 aa18.08■□□□□ 0.48
SNX17-206ENST00000484886 ZNF160Q9HCG1 818 aa18.08■□□□□ 0.48
SNX17-206ENST00000484886 COPG2Q9UBF2 871 aa18.08■□□□□ 0.48
SNX17-206ENST00000484886 ZNF490Q9ULM2 529 aaPredicted RBP18.08■□□□□ 0.48
SNX17-206ENST00000484886 A0A088AWK7 358 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 LRIT2A6NDA9 550 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 PSMD12O00232 456 aaPredicted RBP18.07■□□□□ 0.48
SNX17-206ENST00000484886 PCDH17O14917 1159 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 KLHL41O60662 606 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 HPP00738 406 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 PYGBP11216 843 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 ZNF10P21506 573 aaPredicted RBP18.07■□□□□ 0.48
SNX17-206ENST00000484886 CASP2P42575 452 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 PLA2G16P53816 162 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 TGM3Q08188 693 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 KLRB1Q12918 225 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 DDX39BQ13838 428 aaKnown RBP18.07■□□□□ 0.48
SNX17-206ENST00000484886 PCBP2Q15366 365 aaKnown RBP eCLIP18.07■□□□□ 0.48
SNX17-206ENST00000484886 COLEC12Q5KU26 742 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 GRHL2Q6ISB3 625 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 TRIM40Q6P9F5 258 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 NDUFAF7Q7L592 441 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 MS4A6EQ96DS6 147 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 OR1F2PQ96R84 312 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 REXO4Q9GZR2 422 aaKnown RBP18.07■□□□□ 0.48
SNX17-206ENST00000484886 IPPKQ9H8X2 491 aa18.07■□□□□ 0.48
SNX17-206ENST00000484886 COPS7BQ9H9Q2 264 aaPredicted RBP18.07■□□□□ 0.48
SNX17-206ENST00000484886 C19orf25Q9UFG5 118 aaPredicted RBP18.07■□□□□ 0.48
SNX17-206ENST00000484886 OR2W5A6NFC9 320 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 C4orf51C9J302 202 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 B4GALT2O60909 372 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 SH3BGRLO75368 114 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 WFS1O76024 890 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 UQCRHP07919 91 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 FHP07954 510 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 COX6A1P12074 109 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 KRT15P19012 456 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 TAC1P20366 129 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 IL10P22301 178 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 JAK1P23458 1154 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 HSD17B3P37058 310 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 MYBPC3Q14896 1274 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 VWA5B1Q5TIE3 1220 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 VN1R5Q7Z5H4 357 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 OR2L5Q8NG80 312 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 ACMSDQ8TDX5 336 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 TBC1D20Q96BZ9 403 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 THOC3Q96J01 351 aaKnown RBP18.06■□□□□ 0.48
SNX17-206ENST00000484886 F2RL3Q96RI0 385 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 AICDAQ9GZX7 198 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 PPCSQ9HAB8 311 aa18.06■□□□□ 0.48
SNX17-206ENST00000484886 STX16-NPEPL1H3BU86 382 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 E2F3O00716 465 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 STX16O14662 325 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 B3GALT2O43825 422 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 DNAJB6O75190 326 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 SMIM10L1P0DMW3 83 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 RNH1P13489 461 aaKnown RBP18.05■□□□□ 0.48
SNX17-206ENST00000484886 SERPINB1P30740 379 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 CCNG1P51959 295 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 PHEXP78562 749 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 ABRAXAS2Q15018 415 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 LIPJQ5W064 366 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 METTL2BQ6P1Q9 378 aaKnown RBP18.05■□□□□ 0.48
SNX17-206ENST00000484886 ATG14Q6ZNE5 492 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 LANCL3Q6ZV70 420 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 LCA5Q86VQ0 697 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 LAS2Q8IYD9 372 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 OR7G3Q8NG95 312 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 EPS8L3Q8TE67 593 aaKnown RBP18.05■□□□□ 0.48
SNX17-206ENST00000484886 REPS1Q96D71 796 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 SMIM10Q96HG1 83 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 NOL11Q9H8H0 719 aaKnown RBP18.05■□□□□ 0.48
SNX17-206ENST00000484886 CLK4Q9HAZ1 481 aaKnown RBP18.05■□□□□ 0.48
SNX17-206ENST00000484886 RIC8BQ9NVN3 520 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 ANAPC2Q9UJX6 822 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 PCDHGB7Q9Y5F8 929 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 CFAP46Q8IYW2 2715 aa18.05■□□□□ 0.48
SNX17-206ENST00000484886 BOD1L1Q8NFC6 3051 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 IGHV1-45A0A0A0MS14 117 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 A8MT66 165 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 SUV39H1O43463 412 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 DPM1O60762 260 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 CYC1P08574 325 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 EFNA3P52797 238 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 PCDH1Q08174 1060 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 IFFO1Q0D2I5 559 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 NSDHLQ15738 373 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 CPSF6Q16630 551 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNX17-206ENST00000484886 TMEM205Q6UW68 189 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 CHSY3Q70JA7 882 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 KBTBD2Q8IY47 623 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 CA13Q8N1Q1 262 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 ZNF473Q8WTR7 871 aaKnown RBP18.04■□□□□ 0.48
SNX17-206ENST00000484886 SMAD5Q99717 465 aaKnown RBP18.04■□□□□ 0.48
SNX17-206ENST00000484886 MFRPQ9BY79 579 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 LHPPQ9H008 270 aa18.04■□□□□ 0.48
SNX17-206ENST00000484886 MLXIPLQ9NP71 852 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms