RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 KLHL18O94889 574 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 NSA2O95478 260 aaKnown RBP9.46□□□□□ -0.9
CPSF4-213ENST00000484112 EIF2S1P05198 315 aaKnown RBP9.46□□□□□ -0.9
CPSF4-213ENST00000484112 UQCRHP07919 91 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 GSTA1P08263 222 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 C1GALT1C1LP0DN25 315 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 IL10P22301 178 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 SERPINB1P30740 379 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 CASP2P42575 452 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 SCTRP47872 440 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 OR1D4P47884 311 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 AVPR1BP47901 424 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 ALDH18A1P54886 795 aaKnown RBP9.46□□□□□ -0.9
CPSF4-213ENST00000484112 ARG2P78540 354 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 REEP5Q00765 189 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 SRSF11Q05519 484 aaKnown RBP9.46□□□□□ -0.9
CPSF4-213ENST00000484112 Q0VFX4 171 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 DLG1Q12959 904 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 DSG2Q14126 1118 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 HERC3Q15034 1050 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 PDK4Q16654 411 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 PAGE2BQ5JRK9 111 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 TMEM214Q6NUQ4 689 aaKnown RBP9.46□□□□□ -0.9
CPSF4-213ENST00000484112 VN1R4Q7Z5H5 301 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 SPNS2Q8IVW8 549 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 PRSS58Q8IYP2 241 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 SPATA6LQ8N4H0 392 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 NT5CQ8TCD5 201 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 KCTD4Q8WVF5 259 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 SLC13A3Q8WWT9 602 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 UBE2E3Q969T4 207 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 PTCD3Q96EY7 689 aaKnown RBP9.46□□□□□ -0.9
CPSF4-213ENST00000484112 C10orf90Q96M02 699 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 GPR78Q96P69 363 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 SPSB2Q99619 263 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 SLX1AQ9BQ83 275 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 TMEM79Q9BSE2 394 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 EFCAB11Q9BUY7 163 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 TGIF2Q9GZN2 237 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 VPS11Q9H270 941 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 EPB41L4BQ9H329 900 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 ZNF160Q9HCG1 818 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 C14orf105Q9NVL8 296 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 PLA2G3Q9NZ20 509 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 SUCOQ9UBS9 1254 aaKnown RBP9.46□□□□□ -0.9
CPSF4-213ENST00000484112 CTSFQ9UBX1 484 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 ZNF282Q9UDV7 671 aaPredicted RBP9.46□□□□□ -0.9
CPSF4-213ENST00000484112 SH3BGRL2Q9UJC5 107 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 RUVBL1Q9Y265 456 aaKnown RBP9.46□□□□□ -0.9
CPSF4-213ENST00000484112 MAU2Q9Y6X3 613 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 FER1L5A0AVI2 2057 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 HEATR5BQ9P2D3 2071 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 DIDO1Q9BTC0 2240 aaKnown RBP9.46□□□□□ -0.9
CPSF4-213ENST00000484112 NCF1BA6NI72 391 aaPredicted RBP9.45□□□□□ -0.9
CPSF4-213ENST00000484112 VSTM2BA6NLU5 285 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 NCF1CA8MVU1 366 aaPredicted RBP9.45□□□□□ -0.9
CPSF4-213ENST00000484112 SUPT3HB4E1H0 165 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 STX16-NPEPL1H3BU86 382 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 K7EPI3 171 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 STX16O14662 325 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 TAPBPO15533 448 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 OR1F1O43749 312 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 NRP2O60462 931 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 CDH16O75309 829 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 SUPT3HO75486 399 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 F10P00742 488 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 NUDT17P0C025 328 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 MYBL2P10244 700 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 MTHFD2P13995 350 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 NCF1P14598 390 aaPredicted RBP9.45□□□□□ -0.9
CPSF4-213ENST00000484112 EPB42P16452 691 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 GCAP28676 217 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 BCL6P41182 706 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 KCNC1P48547 511 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 OCA2Q04671 838 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 RGS1Q08116 209 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 MFAP5Q13361 173 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 ART3Q13508 389 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 SETDB1Q15047 1291 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 PCBP2Q15366 365 aaKnown RBP eCLIP9.45□□□□□ -0.9
CPSF4-213ENST00000484112 HIST2H2ACQ16777 129 aaPredicted RBP9.45□□□□□ -0.9
CPSF4-213ENST00000484112 HKDC1Q2TB90 917 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 TECRLQ5HYJ1 363 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 CATSPEREQ5SY80 951 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 UBAP2Q5T6F2 1119 aaKnown RBP9.45□□□□□ -0.9
CPSF4-213ENST00000484112 HIST2H2AA3Q6FI13 130 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 GFRALQ6UXV0 394 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 TMIGD1Q6UXZ0 262 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 SLCO4C1Q6ZQN7 724 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 COX15Q7KZN9 410 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 ABHD13Q7L211 337 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 MRGPRGQ86SM5 289 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 TMPRSS11BQ86T26 416 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 RIBC1Q8N443 379 aaPredicted RBP9.45□□□□□ -0.9
CPSF4-213ENST00000484112 DTWD1Q8N5C7 304 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 OR11G2Q8NGC1 345 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 UBLCP1Q8WVY7 318 aaPredicted RBP9.45□□□□□ -0.9
CPSF4-213ENST00000484112 ITLN2Q8WWU7 325 aaPredicted RBP9.45□□□□□ -0.9
CPSF4-213ENST00000484112 CAVIN3Q969G5 261 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 RELTQ969Z4 430 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms