RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 GAL3ST3Q96A11 431 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 COL26A1Q96A83 441 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 LRFN5Q96NI6 719 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 SORBS1Q9BX66 1292 aaKnown RBP16.93■□□□□ 0.3
CPNE1-224ENST00000483359 ADGRE2Q9UHX3 823 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 PADI1Q9ULC6 663 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 SLC12A4Q9UP95 1085 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 SLC22A7Q9Y694 548 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.92■□□□□ 0.3
CPNE1-224ENST00000483359 KLHL18O94889 574 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 UROSP10746 265 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 AGXTP21549 392 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 AVPR1BP47901 424 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 RAP1GDS1P52306 607 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 EMP3P54852 163 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 FOXL2P58012 376 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 BTN3A2P78410 334 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 FAM53BQ14153 422 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 HERC3Q15034 1050 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 ADPRMQ3LIE5 342 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 NKAIN1Q4KMZ8 207 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 CHSY3Q70JA7 882 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 VASH2Q86V25 355 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 OR2L5Q8NG80 312 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 OR5T3Q8NGG3 340 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 FAR2Q96K12 515 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 DCBLD2Q96PD2 775 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 SORT1Q99523 831 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 YIPF2Q9BWQ6 316 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 ZNF304Q9HCX3 659 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 HCN3Q9P1Z3 774 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 TSC22D4Q9Y3Q8 395 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 LAMA5O15230 3695 aa16.92■□□□□ 0.3
CPNE1-224ENST00000483359 SKAP2O75563 359 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-224ENST00000483359 HMGCS1Q01581 520 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 SRSF6Q13247 344 aaKnown RBP16.91■□□□□ 0.3
CPNE1-224ENST00000483359 FAM69BQ5VUD6 431 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 MLIPQ5VWP3 458 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 KANK2Q63ZY3 851 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 ATG16L1Q676U5 607 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 TRIM42Q8IWZ5 723 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 KCNE4Q8WWG9 221 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 ZNF75CPQ92670 426 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-224ENST00000483359 MRPL1Q9BYD6 325 aaKnown RBP16.91■□□□□ 0.3
CPNE1-224ENST00000483359 SLC22A11Q9NSA0 550 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 IFT80Q9P2H3 777 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-224ENST00000483359 CROTQ9UKG9 612 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 TRAF6Q9Y4K3 522 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 DNAJC15Q9Y5T4 150 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 DMXL2Q8TDJ6 3036 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 LOC101059948A0A1B0GTJ6 334 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 FOXE1O00358 373 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-224ENST00000483359 PLPP1O14494 284 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 GALR3O60755 368 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-224ENST00000483359 NSA2O95478 260 aaKnown RBP16.91■□□□□ 0.3
CPNE1-224ENST00000483359 TCN2P20062 427 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 FBLP22087 321 aaKnown RBP16.91■□□□□ 0.3
CPNE1-224ENST00000483359 PTX3P26022 381 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-224ENST00000483359 CERS1P27544 350 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 STAT5AP42229 794 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 CLN3Q13286 438 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 DEPDC1Q5TB30 811 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 PRMT9Q6P2P2 845 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 ABHD17CQ6PCB6 329 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 FAM198BQ6UWH4 519 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 AFAP1L2Q8N4X5 818 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 ZNF248Q8NDW4 579 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 LRRC8CQ8TDW0 803 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 CT55Q8WUE5 264 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 MVB12AQ96EY5 273 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 CENPKQ9BS16 269 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 ACPTQ9BZG2 426 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 COPS7BQ9H9Q2 264 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-224ENST00000483359 CTSFQ9UBX1 484 aa16.91■□□□□ 0.3
CPNE1-224ENST00000483359 DNAJB6O75190 326 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 APC2O95996 2303 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 DLSTP36957 453 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 SSR2P43308 183 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 MAP7Q14244 749 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 ZNF517Q6ZMY9 492 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-224ENST00000483359 COX15Q7KZN9 410 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 UBE3DQ7Z6J8 389 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 DDIASQ8IXT1 998 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 CLYBLQ8N0X4 340 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 AMER3Q8N944 861 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 SNIP1Q8TAD8 396 aaKnown RBP16.9■□□□□ 0.3
CPNE1-224ENST00000483359 RAB3IL1Q8TBN0 382 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 TWIST2Q8WVJ9 160 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 ZCCHC14Q8WYQ9 949 aaKnown RBP16.9■□□□□ 0.3
CPNE1-224ENST00000483359 KCNC2Q96PR1 638 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 SERPINI1Q99574 410 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 RBCK1Q9BYM8 510 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 TRPC4Q9UBN4 977 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 DKK4Q9UBT3 224 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 MARCOQ9UEW3 520 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-224ENST00000483359 CDC14AQ9UNH5 594 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 RAXQ9Y2V3 346 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 RAP2CQ9Y3L5 183 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 CFAP47Q6ZTR5 3102 aa16.9■□□□□ 0.3
CPNE1-224ENST00000483359 KLK10O43240 276 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms