RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 DBF4BQ8NFT6 615 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 OR7G3Q8NG95 312 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 OR4K1Q8NGD4 311 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 OR13J1Q8NGT2 312 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 ZNF473Q8WTR7 871 aaKnown RBP3.35□□□□□ -1.87
GTF3A-207ENST00000482655 FCAMRQ8WWV6 532 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 IRGQQ8WZA9 623 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 ST6GALNAC6Q969X2 333 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 PGM2Q96G03 612 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 AK8Q96MA6 479 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 RAD9AQ99638 391 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 ASCL2Q99929 193 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 RTP3Q9BQQ7 232 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 URM1Q9BTM9 101 aaKnown RBP3.35□□□□□ -1.87
GTF3A-207ENST00000482655 TMEM206Q9H813 350 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 DBNDD1Q9H9R9 158 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 Q9N2K0 584 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 TMEM161AQ9NX61 479 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 CACNG4Q9UBN1 327 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 LRWD1Q9UFC0 647 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 ACAD8Q9UKU7 415 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 ITM2BQ9Y287 266 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 IBTKQ9P2D0 1353 aaPredicted RBP3.35□□□□□ -1.87
GTF3A-207ENST00000482655 VCANP13611 3396 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 IGKV3D-20A0A0C4DH25 116 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 ANKRD61A6NGH8 418 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 C5orf52A6NGY3 159 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 SNX3O60493 162 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 RAD51DO75771 328 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 GOSR1O95249 250 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 KRT5P13647 590 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 TCF4P15884 667 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 ITIH1P19827 911 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 MSH3P20585 1137 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 THOP1P52888 689 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 ST8SIA6P61647 398 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 GNB1P62873 340 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 ASIC1P78348 528 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 PPP2R5CQ13362 524 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 CA9Q16790 459 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 KBTBD12Q3ZCT8 623 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.34□□□□□ -1.87
GTF3A-207ENST00000482655 ZC2HC1BQ5TFG8 222 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 TXNRD3NBQ6F5E7 133 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 ZNF497Q6ZNH5 498 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 TMEM182Q6ZP80 229 aaPredicted RBP3.34□□□□□ -1.87
GTF3A-207ENST00000482655 ANO5Q75V66 913 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 ANKRD13CQ8N6S4 541 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 OR1J1Q8NGS3 322 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 OCC1Q8TAD7 63 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 TAF15Q92804 592 aaKnown RBP eCLIP3.34□□□□□ -1.87
GTF3A-207ENST00000482655 RIT1Q92963 219 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 PTP4A1Q93096 173 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 ZBED3Q96IU2 234 aaPredicted RBP3.34□□□□□ -1.87
GTF3A-207ENST00000482655 HNRNPABQ99729 332 aaKnown RBP3.34□□□□□ -1.87
GTF3A-207ENST00000482655 PSD2Q9BQI7 771 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 S1PR5Q9H228 398 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 ARRDC1-AS1Q9H2J1 176 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 DNAJC17Q9NVM6 304 aaKnown RBP3.34□□□□□ -1.87
GTF3A-207ENST00000482655 CWC25Q9NXE8 425 aaPredicted RBP3.34□□□□□ -1.87
GTF3A-207ENST00000482655 ZDHHC2Q9UIJ5 367 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 DAPK2Q9UIK4 370 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 FBXL5Q9UKA1 691 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 TMED3Q9Y3Q3 217 aa3.34□□□□□ -1.87
GTF3A-207ENST00000482655 A0A1W2PN81 502 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 SDR42E2A6NKP2 422 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 KBTBD13C9JR72 458 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 DDX39AO00148 427 aaKnown RBP3.33□□□□□ -1.88
GTF3A-207ENST00000482655 ARPC2O15144 300 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 FLRT2O43155 660 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 ECE2O60344 883 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 FCGR3BO75015 233 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 PRKRAO75569 313 aaKnown RBP3.33□□□□□ -1.88
GTF3A-207ENST00000482655 PIGNO95427 931 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 GSRP00390 522 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 STAG3L1P0CL83 205 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 C8orf89P0DMQ9 161 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 IGHV4-38-2P0DP08 117 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 GNB3P16520 340 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 STMN1P16949 149 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 HLA-DPA1P20036 260 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 CHRNA7P36544 502 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 RPL21P46778 160 aaKnown RBP3.33□□□□□ -1.88
GTF3A-207ENST00000482655 NPBWR1P48145 328 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 CDH11P55287 796 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 PTENP60484 403 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 SULT2A1Q06520 285 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 RBBP7Q16576 425 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 PTGISQ16647 500 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 CTU2Q2VPK5 515 aaKnown RBP3.33□□□□□ -1.88
GTF3A-207ENST00000482655 UGT3A2Q3SY77 523 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 LACTB2Q53H82 288 aaPredicted RBP3.33□□□□□ -1.88
GTF3A-207ENST00000482655 ZNF789Q5FWF6 425 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 CYP4A22Q5TCH4 519 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 FAM53AQ6NSI3 398 aaPredicted RBP3.33□□□□□ -1.88
GTF3A-207ENST00000482655 STXBP4Q6ZWJ1 553 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 PLD3Q8IV08 490 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 TMEM139Q8IV31 216 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 CARNMT1Q8N4J0 409 aa3.33□□□□□ -1.88
GTF3A-207ENST00000482655 CHCHD4Q8N4Q1 142 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms