RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 CCNT2O60583 730 aaKnown RBP9.84□□□□□ -0.83
CPSF4-212ENST00000482251 LDLRP01130 860 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 C1QAP02745 245 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 CYC1P08574 325 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 C1GALT1C1LP0DN25 315 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 ICAM2P13598 275 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 EDN3P14138 238 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 GNAZP19086 355 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 JAK1P23458 1154 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 COL8A1P27658 744 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 HNRNPH1P31943 449 aaKnown RBP9.84□□□□□ -0.83
CPSF4-212ENST00000482251 MAGEA4P43358 317 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 HNMTP50135 292 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 RAB10P61026 200 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 AP2B1P63010 937 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 SKP1P63208 163 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 BTN3A2P78410 334 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 BMPR2Q13873 1038 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 UBAP2Q5T6F2 1119 aaKnown RBP9.84□□□□□ -0.83
CPSF4-212ENST00000482251 C8orf74Q6P047 294 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 SLCO4C1Q6ZQN7 724 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 RAPH1Q70E73 1250 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 FAM47BQ8NA70 645 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 TRPV3Q8NET8 790 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 SUN3Q8TAQ9 357 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 FBF1Q8TES7 1133 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 CREB3L4Q8TEY5 395 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 ANKRD7Q92527 254 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 HAS2Q92819 552 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 PTCHD1Q96NR3 888 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 LPAR4Q99677 370 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 NPAS2Q99743 824 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 SLX1AQ9BQ83 275 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 HES7Q9BYE0 225 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 ALG9Q9H6U8 611 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 KLHL1Q9NR64 748 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 DNAJC11Q9NVH1 559 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 STMN3Q9NZ72 180 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 TEKT2Q9UIF3 430 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 RNF112Q9ULX5 631 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 ASB1Q9Y576 335 aa9.84□□□□□ -0.83
CPSF4-212ENST00000482251 URADA6NGE7 173 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 SUPT3HB4E1H0 165 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 LRRTM2O43300 516 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 PRMT3O60678 531 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 PRAMEF4O60810 478 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 PRAMEF2O60811 474 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 SH3BGRLO75368 114 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 SUPT3HO75486 399 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 RASAL1O95294 804 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 CLDN1O95832 211 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 S100BP04271 92 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-212ENST00000482251 SERPINA6P08185 405 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 SLC35E2BP0CK96 405 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 RNH1P13489 461 aaKnown RBP9.83□□□□□ -0.84
CPSF4-212ENST00000482251 TFEBP19484 476 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 STX2P32856 288 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 TDGF1P3P51864 188 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 PLA2G16P53816 162 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 SLC26A5P58743 744 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 IRF9Q00978 393 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 DLG1Q12959 904 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 TUBA3CQ13748 450 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 ZKSCAN8Q15776 578 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-212ENST00000482251 UAP1Q16222 522 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-212ENST00000482251 EXT1Q16394 746 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 PDK4Q16654 411 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 C4orf17Q53FE4 359 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 XKR6Q5GH73 641 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 ZNF766Q5HY98 468 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 ACER2Q5QJU3 275 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 PRAMEF9Q5VWM5 478 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 C1QL3Q5VWW1 255 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 TUBA3EQ6PEY2 450 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 TMIGD1Q6UXZ0 262 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 VN1R5Q7Z5H4 357 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 CA13Q8N1Q1 262 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 PLPP5Q8NEB5 264 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 SREK1Q8WXA9 508 aaKnown RBP9.83□□□□□ -0.84
CPSF4-212ENST00000482251 GAL3ST3Q96A11 431 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 SIGLEC12Q96PQ1 595 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 RNF32Q9H0A6 362 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 TSPAN10Q9H1Z9 355 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-212ENST00000482251 MMP25Q9NPA2 562 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 NECTIN3Q9NQS3 549 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 SH3BGRL2Q9UJC5 107 aa9.83□□□□□ -0.84
CPSF4-212ENST00000482251 NBPF19A0A087WUL8 3843 aa9.82□□□□□ -0.84
CPSF4-212ENST00000482251 MYOCOSA0A1B0GUC4 107 aa9.82□□□□□ -0.84
CPSF4-212ENST00000482251 GABRR3A8MPY1 467 aa9.82□□□□□ -0.84
CPSF4-212ENST00000482251 UBXN8O00124 270 aa9.82□□□□□ -0.84
CPSF4-212ENST00000482251 H2AFYO75367 372 aaKnown RBP9.82□□□□□ -0.84
CPSF4-212ENST00000482251 STK16O75716 305 aa9.82□□□□□ -0.84
CPSF4-212ENST00000482251 UNC5CO95185 931 aa9.82□□□□□ -0.84
CPSF4-212ENST00000482251 SMIM10L1P0DMW3 83 aa9.82□□□□□ -0.84
CPSF4-212ENST00000482251 CD22P20273 847 aa9.82□□□□□ -0.84
CPSF4-212ENST00000482251 IL10P22301 178 aa9.82□□□□□ -0.84
CPSF4-212ENST00000482251 MST1P26927 711 aa9.82□□□□□ -0.84
CPSF4-212ENST00000482251 CERS1P27544 350 aa9.82□□□□□ -0.84
CPSF4-212ENST00000482251 PPP2R1BP30154 601 aa9.82□□□□□ -0.84
CPSF4-212ENST00000482251 SPRP35270 261 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms