RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 SERPINB9P50453 376 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 RHAGQ02094 409 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 IRF8Q02556 426 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 LAPTM5Q13571 262 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 DOC2AQ14183 400 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 ACAP2Q15057 778 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 TLR1Q15399 786 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 TBCCQ15814 346 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 HIST2H2ACQ16777 129 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-213ENST00000482192 PRR30Q53SZ7 412 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-213ENST00000482192 HIST2H2AA3Q6FI13 130 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 LANCL3Q6ZV70 420 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 IFT20Q8IY31 132 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 GALNT11Q8NCW6 608 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 PLPP5Q8NEB5 264 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 BRIX1Q8TDN6 353 aaKnown RBP11.2□□□□□ -0.62
HMGN1-213ENST00000482192 CCT6BQ92526 530 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 PSMF1Q92530 271 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 GAL3ST3Q96A11 431 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 SMIM10Q96HG1 83 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 FAR2Q96K12 515 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 PAFAH2Q99487 392 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 KLHL31Q9H511 634 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 PTGFRNQ9P2B2 879 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 MAP10Q9P2G4 905 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 OPTCQ9UBM4 332 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 ASB1Q9Y576 335 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 A0A087WUV0 522 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-213ENST00000482192 IGHV3-20A0A0C4DH32 117 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 DYTNA2CJ06 578 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 OR2W5A6NFC9 320 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 C4orf51C9J302 202 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 K7EPI3 171 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 PSMD12O00232 456 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-213ENST00000482192 ERI3O43414 337 aaKnown RBP11.19□□□□□ -0.62
HMGN1-213ENST00000482192 PRAMEF4O60810 478 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 B4GALT2O60909 372 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 DNAJB6O75190 326 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 KRT38O76015 456 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 CELA2AP08217 269 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 RNH1P13489 461 aaKnown RBP11.19□□□□□ -0.62
HMGN1-213ENST00000482192 MTHFD2P13995 350 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 GFAPP14136 432 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 EPORP19235 508 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 CNTFP26441 200 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 HNRNPH1P31943 449 aaKnown RBP11.19□□□□□ -0.62
HMGN1-213ENST00000482192 SOX11P35716 441 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 BTN3A2P78410 334 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 CHIT1Q13231 466 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 NAA30Q147X3 362 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-213ENST00000482192 EXT1Q16394 746 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 BTBD16Q32M84 506 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 PRAMEF9Q5VWM5 478 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 B3GNTL1Q67FW5 361 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-213ENST00000482192 PLAG1Q6DJT9 500 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 CUZD1Q86UP6 607 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 SIRT6Q8N6T7 355 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 OR2L5Q8NG80 312 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 DNAJB14Q8TBM8 379 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 UBE2E3Q969T4 207 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 ISL2Q96A47 359 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 SNRNP40Q96DI7 357 aaKnown RBP11.19□□□□□ -0.62
HMGN1-213ENST00000482192 MS4A6EQ96DS6 147 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 CNDP1Q96KN2 507 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 SLC29A3Q9BZD2 475 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 REXO4Q9GZR2 422 aaKnown RBP11.19□□□□□ -0.62
HMGN1-213ENST00000482192 VPS11Q9H270 941 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 RHBGQ9H310 441 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 TEKT2Q9UIF3 430 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 ZNF180Q9UJW8 692 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 ZNF490Q9ULM2 529 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-213ENST00000482192 NFU1Q9UMS0 254 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 PCDHGA10Q9Y5H3 936 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 CSAG2Q9Y5P2 127 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 CCDC88CQ9P219 2028 aa11.19□□□□□ -0.62
HMGN1-213ENST00000482192 MED13Q9UHV7 2174 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 KLK8O60259 260 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 PRMT3O60678 531 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 ABHD2P08910 425 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 ITGAMP11215 1152 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 EPB42P16452 691 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 CD22P20273 847 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 SERPINB1P30740 379 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 CASP2P42575 452 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 MSH2P43246 934 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 MAGEA12P43365 314 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 TSFMP43897 325 aaKnown RBP11.18□□□□□ -0.62
HMGN1-213ENST00000482192 ALDH18A1P54886 795 aaKnown RBP11.18□□□□□ -0.62
HMGN1-213ENST00000482192 ARG2P78540 354 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 ACTN3Q08043 901 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-213ENST00000482192 PCDH1Q08174 1060 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 TGM3Q08188 693 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 E2F2Q14209 437 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 ZNF169Q14929 603 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-213ENST00000482192 SETDB1Q15047 1291 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 PFKFB4Q16877 469 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 ADPRMQ3LIE5 342 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 SFT2D3Q587I9 215 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 ADNP2Q6IQ32 1131 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 TRIM40Q6P9F5 258 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms