RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.16□□□□□ -1.74
CALD1-219ENST00000480638 BSCL2Q96G97 398 aaPredicted RBP4.16□□□□□ -1.74
CALD1-219ENST00000480638 PCDHB18PQ96TA0 734 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 ATF6BQ99941 703 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 ZNF577Q9BSK1 485 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 CHCHD5Q9BSY4 110 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 PAPOLGQ9BWT3 736 aaKnown RBP4.16□□□□□ -1.74
CALD1-219ENST00000480638 DPEP2Q9H4A9 486 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 MINDY3Q9H8M7 445 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 MRPS18CQ9Y3D5 142 aaKnown RBP4.16□□□□□ -1.74
CALD1-219ENST00000480638 POMT1Q9Y6A1 747 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 SIGLEC5O15389 551 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 MLNRO43193 412 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 CTNNA2P26232 953 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 OR3A1P47881 315 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 PPA1Q15181 289 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 LRRC37A5PQ49AS3 106 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 DCLRE1AQ6PJP8 1040 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 PHC2Q8IXK0 858 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 DNASE1L2Q92874 299 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 C11orf52Q96A22 123 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 NACAP1Q9BZK3 213 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 FNDC4Q9H6D8 234 aaPredicted RBP4.15□□□□□ -1.75
CALD1-219ENST00000480638 HEXA-AS1Q9H8Q6 139 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 C3orf14Q9HBI5 128 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 GTSE1Q9NYZ3 720 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 PILRAQ9UKJ1 303 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 NCKAP1Q9Y2A7 1128 aa4.15□□□□□ -1.75
CALD1-219ENST00000480638 A0A0B4J203 849 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 TBCAO75347 108 aaKnown RBP4.14□□□□□ -1.75
CALD1-219ENST00000480638 SRSF10O75494 262 aaKnown RBP4.14□□□□□ -1.75
CALD1-219ENST00000480638 HOXD4P09016 255 aaPredicted RBP4.14□□□□□ -1.75
CALD1-219ENST00000480638 PCP11498 1178 aaKnown RBP4.14□□□□□ -1.75
CALD1-219ENST00000480638 IL4RP24394 825 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 FEN1P39748 380 aaKnown RBP4.14□□□□□ -1.75
CALD1-219ENST00000480638 PTGER3P43115 390 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 FCHO2Q0JRZ9 810 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 PET117Q6UWS5 81 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 ZNF841Q6ZN19 808 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 Q6ZVQ6 151 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 VSIG1Q86XK7 387 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 SPPL2AQ8TCT8 520 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.14□□□□□ -1.75
CALD1-219ENST00000480638 CORO2AQ92828 525 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 FAM162AQ96A26 154 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 ZMAT2Q96NC0 199 aaKnown RBP4.14□□□□□ -1.75
CALD1-219ENST00000480638 PUS3Q9BZE2 481 aaKnown RBP4.14□□□□□ -1.75
CALD1-219ENST00000480638 IL1RAPQ9NPH3 570 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 TMOD3Q9NYL9 352 aa4.14□□□□□ -1.75
CALD1-219ENST00000480638 DBF4Q9UBU7 674 aaPredicted RBP4.14□□□□□ -1.75
CALD1-219ENST00000480638 SRRM5B3KS81 715 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 LMO7DNF2Z398 122 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 TNFSF12O43508 249 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 KRT3P12035 628 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 SCG2P13521 617 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 PIK3R1P27986 724 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 ATP4BP51164 291 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 KRTAP10-3P60369 221 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 RPP38P78345 283 aaKnown RBP4.13□□□□□ -1.75
CALD1-219ENST00000480638 FOLH1Q04609 750 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 MLF2Q15773 248 aaPredicted RBP4.13□□□□□ -1.75
CALD1-219ENST00000480638 FAM182AQ5T1J6 154 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.13□□□□□ -1.75
CALD1-219ENST00000480638 MPP7Q5T2T1 576 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 TCEAL6Q6IPX3 200 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 FAM47EQ6ZV65 393 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 RNF130Q86XS8 419 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 C4orf19Q8IY42 314 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 TDHQ8IZJ6 230 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 SPAG16Q8N0X2 631 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 SSC4DQ8WTU2 575 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 PDRG1Q9NUG6 133 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 PCDHGA1Q9Y5H4 931 aa4.13□□□□□ -1.75
CALD1-219ENST00000480638 YDJCA8MPS7 323 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 ARHGEF33A8MVX0 844 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 SHISA9B4DS77 424 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 TCP10L2B9ZVM9 353 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 WDR46O15213 610 aaKnown RBP4.12□□□□□ -1.75
CALD1-219ENST00000480638 RLN1P04808 185 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 FOLR2P14207 255 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 SRD5A2P31213 254 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 NDUFV3P56181 108 aaKnown RBP4.12□□□□□ -1.75
CALD1-219ENST00000480638 ABCE1P61221 599 aaKnown RBP4.12□□□□□ -1.75
CALD1-219ENST00000480638 SCN1BQ07699 218 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 GCKRQ14397 625 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 ARMCX4Q5H9R4 360 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 GLRX5Q86SX6 157 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 SLC25A42Q86VD7 318 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 CD99L2Q8TCZ2 262 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 DEPDC1BQ8WUY9 529 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 MR1Q95460 341 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 SGF29Q96ES7 293 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 RPP25Q9BUL9 199 aaKnown RBP4.12□□□□□ -1.75
CALD1-219ENST00000480638 OCR1Q9BZK8 76 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 SLC7A10Q9NS82 523 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 GMEB2Q9UKD1 530 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 ITGA11Q9UKX5 1188 aa4.12□□□□□ -1.75
CALD1-219ENST00000480638 HBS1LQ9Y450 684 aaKnown RBP4.12□□□□□ -1.75
CALD1-219ENST00000480638 ILVBLA1L0T0 632 aa4.11□□□□□ -1.75
CALD1-219ENST00000480638 A8MU76 341 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms