RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 TSNAXQ99598 290 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 URM1Q9BTM9 101 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 OR51V1Q9H2C8 321 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 NSUN3Q9H649 340 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 MEPEQ9NQ76 525 aaPredicted RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 HEBP1Q9NRV9 189 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 PAQR5Q9NXK6 330 aaPredicted RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 CFAP97Q9P2B7 532 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ACSL5Q9ULC5 683 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 WDR45Q9Y484 360 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 RAB19A4D1S5 217 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 TTLL8A6PVC2 850 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 SPTLC1O15269 473 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 MSI1O43347 362 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 S1PR4O95977 384 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 GNALP38405 381 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 PSMA6P60900 246 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 SF3A2Q15428 464 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 NTRK2Q16620 822 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 UGT3A2Q3SY77 523 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 AGAP7PQ5VUJ5 663 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 HAGHLQ6PII5 290 aaPredicted RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 TMEM220Q6QAJ8 160 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 NPAS4Q8IUM7 802 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 TMEM145Q8NBT3 493 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 OR52N2Q8NGI0 321 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 SUN3Q8TAQ9 357 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 GNPDA2Q8TDQ7 276 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ADAMTS16Q8TE57 1224 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 SGTBQ96EQ0 304 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 HSPA12BQ96MM6 686 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 PBDC1Q9BVG4 233 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 RIOK2Q9BVS4 552 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 RGS17Q9UGC6 210 aaPredicted RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 BTNL2Q9UIR0 455 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 SIX4Q9UIU6 781 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ZCWPW2A0A1B0GU75 182 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 AGAP5A6NIR3 686 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ELOA3DA6NLF2 546 aaPredicted RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 PIRO00625 290 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 MMP12P39900 470 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ALDH3B2P48448 385 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 RAP2BP61225 183 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 EN1Q05925 392 aaPredicted RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 PON2Q15165 354 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 TAZQ16635 292 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ELOA3BQ3SY89 546 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 SYPL2Q5VXT5 272 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 TPGS1Q6ZTW0 290 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 TPRA1Q86W33 373 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 TICAM1Q8IUC6 712 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 AQP11Q8NBQ7 271 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ELOA3Q8NG57 546 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 SHKBP1Q8TBC3 707 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 MKRN2Q9H000 416 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 FBRSL1Q9HCM7 1045 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 KLHL21Q9UJP4 597 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 PLCL2Q9UPR0 1127 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 TMEM131LA2VDJ0 1609 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 LOC730098B7Z3J9 87 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 CASC3O15234 703 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 SULT1B1O43704 296 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 KDM4BO94953 1096 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 AHSA1O95433 338 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 DEFA5Q01523 94 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 PPIGQ13427 754 aaKnown RBP eCLIP5.94□□□□□ -1.461e-6■■■□□ 16.4
PRPF4B-205ENST00000480058 UBXN11Q5T124 520 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 TNFAIP8L2Q6P589 184 aaPredicted RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 FAM198BQ6UWH4 519 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 CEACAM20Q6UY09 585 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 NAPRTQ6XQN6 538 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 PGAP1Q75T13 922 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 SERPINA11Q86U17 422 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 CHDHQ8NE62 594 aaPredicted RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ATP6V1C2Q8NEY4 427 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ADAMTS18Q8TE60 1221 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 CRYGNQ8WXF5 182 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 HIST1H2AAQ96QV6 131 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 MTERF1Q99551 399 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ABCD2Q9UBJ2 740 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 PRODH2Q9UF12 536 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 CDC7O00311 574 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 UPK1BO75841 260 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 NT5EP21589 574 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 HOXD12P35452 270 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ZNF155Q12901 538 aaPredicted RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 TDGQ13569 410 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 CLVS2Q5SYC1 327 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 RAB12Q6IQ22 244 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ZNF613Q6PF04 617 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 ULK3Q6PHR2 472 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 B3GNT9Q6UX72 402 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 GOLGA7Q7Z5G4 137 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 THOC6Q86W42 341 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 CMTR2Q8IYT2 770 aaKnown RBP5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 RGL4Q8IZJ4 473 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 EID2Q8N6I1 236 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 OR13C4Q8NGS5 318 aa5.94□□□□□ -1.46
PRPF4B-205ENST00000480058 VMP1Q96GC9 406 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms