RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 OR7G1Q8NGA0 311 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 OR10G2Q8NGC3 310 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 UBTD2Q8WUN7 234 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 SH3KBP1Q96B97 665 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 TRMT2BQ96GJ1 504 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 CEP19Q96LK0 163 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 MGLLQ99685 303 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 C2orf49Q9BVC5 232 aaPredicted RBP12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 TPT1P8Q9HAU6 139 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 PCDHGB3Q9Y5G1 929 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 DOCK6Q96HP0 2047 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 J3KTA2 159 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 HOXA2O43364 376 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 SUV39H1O43463 412 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 SPAM1P38567 509 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 RPS19P39019 145 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 GALK2Q01415 458 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 KRR1Q13601 381 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 E2F2Q14209 437 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 ZNF79Q15937 498 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 RETSATQ6NUM9 610 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 LYPD8Q6UX82 237 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 LAX1Q8IWV1 398 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 PHOX2BQ99453 314 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 CNPPD1Q9BV87 410 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 SLC29A3Q9BZD2 475 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 ATG10Q9H0Y0 220 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 ABCB8Q9NUT2 735 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 NPAP1Q9NZP6 1156 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 OGDHLQ9ULD0 1010 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 FZD4Q9ULV1 537 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 ANAPC1Q9H1A4 1944 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 PNMA8CA0A1B0GUJ8 204 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 PCDH7O60245 1069 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 HLA-EP13747 358 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 COX7A2P14406 83 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 SOX6P35712 828 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 CDH12P55289 794 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 GAB1Q13480 694 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 FBXO43Q4G163 708 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 SYT12Q8IV01 421 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 CHST14Q8NCH0 376 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 ASB15Q8WXK1 588 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 PIK3R3Q92569 461 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 POP5Q969H6 163 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 TRMT61AQ96FX7 289 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 ZFYVE19Q96K21 471 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 SLC32A1Q9H598 525 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 RANGRFQ9HD47 186 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 TIGARQ9NQ88 270 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 CCL26Q9Y258 94 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 KLK4Q9Y5K2 254 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 V9GYH0 126 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 MYOFQ9NZM1 2061 aa12.79□□□□□ -0.36
PDZRN3-208ENST00000479530 MEIOCA2RUB1 952 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 CENPBD1B2RD01 187 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 TEX28O15482 410 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 SRCP12931 536 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 HLA-FP30511 346 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 SOX3P41225 446 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 DMC1Q14565 340 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 EXOC3L2Q2M3D2 409 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 NAGSQ8N159 534 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 SCAMP4Q969E2 229 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 CMTM7Q96FZ5 175 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 GDF15Q99988 308 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 BBS2Q9BXC9 721 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 MAU2Q9Y6X3 613 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 SLITRK5O94991 958 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 DDOSTP39656 456 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 PTCHD3Q3KNS1 767 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 ADNP2Q6IQ32 1131 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 UBE2R2Q712K3 238 aaPredicted RBP12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 PEX5LQ8IYB4 626 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 UBE2J2Q8N2K1 259 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 GTPBP3Q969Y2 492 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 ASIC4Q96FT7 647 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 RNF170Q96K19 258 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 COPS8Q99627 209 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 P2RY13Q9BPV8 354 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 HTATIP2Q9BUP3 242 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 CCDC32Q9BV29 185 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 CHST8Q9H2A9 424 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 SMURF1Q9HCE7 757 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 EXOSC4Q9NPD3 245 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 DUSP12Q9UNI6 340 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 SLC22A14Q9Y267 594 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 CFL2Q9Y281 166 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 MYO7AQ13402 2215 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 DNAH14Q0VDD8 3507 aa12.78□□□□□ -0.36
PDZRN3-208ENST00000479530 A0A1W2PRU2 124 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 TMEM202A6NGA9 273 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 WWP2O00308 870 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 PITPNM1O00562 1244 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 ANXA5P08758 320 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 EPHB3P54753 998 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 DEFB103AP81534 67 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 BOP1Q14137 746 aaKnown RBP12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 ARMC4Q5T2S8 1044 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 TPGS2Q68CL5 300 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms