RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ART5Q96L15 291 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 IRF2BPLQ9H1B7 796 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 CNOT11Q9UKZ1 510 aaKnown RBP13.83□□□□□ -0.2
COL20A1-206ENST00000479501 H0YAE9 185 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 PAK4O96013 591 aaPredicted RBP13.83□□□□□ -0.2
COL20A1-206ENST00000479501 NDUFS1P28331 727 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 STT3AP46977 705 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 NTHL1P78549 312 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 PEX5LQ8IYB4 626 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 PIGXQ8TBF5 258 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 ISL2Q96A47 359 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 MYRFLQ96LU7 910 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 SGIP1Q9BQI5 828 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 NEUROD4Q9HD90 331 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 P2RX2Q9UBL9 471 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 PHF11Q9UIL8 331 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 OR6C70A6NIJ9 312 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 FAM47E-STBD1D6RA91 191 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 MVKQ03426 396 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 TUBA3CQ13748 450 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 LRP8Q14114 963 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 CCDC157Q569K6 752 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 PGM2L1Q6PCE3 622 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 CLIP4Q8N3C7 705 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 POLR2J2Q9GZM3 115 aaKnown RBP13.83□□□□□ -0.2
COL20A1-206ENST00000479501 ADAP2Q9NPF8 381 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 TMEM181Q9P2C4 612 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 POFUT2Q9Y2G5 429 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 PRAMEF33A0A0G2JMD5 474 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 PRAMEF10O60809 474 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 BMP2P12643 396 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 DEFB103AP81534 67 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 IQCCQ4KMZ1 466 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 OR8H3Q8N146 312 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 C1QTNF1Q9BXJ1 281 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 MARCH5Q9NX47 278 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 COMMD3Q9UBI1 195 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 MALT1Q9UDY8 824 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 H7BY64 318 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 ABCB7O75027 752 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 KLKB1P03952 638 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 PSKH1P11801 424 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF8P17098 575 aaPredicted RBP13.82□□□□□ -0.2
COL20A1-206ENST00000479501 TIA1P31483 386 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL20A1-206ENST00000479501 PTGS2P35354 604 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 CCDC36Q8IYA8 594 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 RBM18Q96H35 190 aaKnown RBP13.82□□□□□ -0.2
COL20A1-206ENST00000479501 PRAP1Q96NZ9 151 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 SLC22A4Q9H015 551 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 IGLV3-10A0A075B6K4 115 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 SOCS2O14508 198 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 FOXD2O60548 495 aaPredicted RBP13.82□□□□□ -0.2
COL20A1-206ENST00000479501 AKT2P31751 481 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 BMPR1AP36894 532 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 EIF4HQ15056 248 aaKnown RBP13.82□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF404Q494X3 552 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 CRTC2Q53ET0 693 aaPredicted RBP13.82□□□□□ -0.2
COL20A1-206ENST00000479501 HTR3DQ70Z44 454 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 MAVSQ7Z434 540 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 IL4I1Q96RQ9 567 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 DUXAA6NLW8 204 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 H3BNH8 94 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 ACOX3O15254 700 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 CHST10O43529 356 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 B3GALT2O43825 422 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 IFNGP01579 166 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 STATHP02808 62 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 OMPP47874 163 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 RCAN2Q14206 197 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 CPXM2Q8N436 756 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 SMOXQ9NWM0 555 aa13.82□□□□□ -0.2
COL20A1-206ENST00000479501 NDUFS4O43181 175 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 CTSOP43234 321 aaPredicted RBP13.81□□□□□ -0.2
COL20A1-206ENST00000479501 TBPL1P62380 186 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF155Q12901 538 aaPredicted RBP13.81□□□□□ -0.2
COL20A1-206ENST00000479501 GRM2Q14416 872 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 NDUFA9Q16795 377 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 CRB2Q5IJ48 1285 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 CXorf57Q6NSI4 855 aaKnown RBP13.81□□□□□ -0.2
COL20A1-206ENST00000479501 COMMD2Q86X83 199 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 RNF130Q86XS8 419 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 FATE1Q969F0 183 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 RAB7BQ96AH8 199 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 MTG2Q9H4K7 406 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF696Q9H7X3 374 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 ARMC1Q9NVT9 282 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 UTS2RQ9UKP6 389 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 NDRG2Q9UN36 371 aaKnown RBP13.81□□□□□ -0.2
COL20A1-206ENST00000479501 PCDHGA3Q9Y5H0 932 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 N6AMT1Q9Y5N5 214 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 CLDN4O14493 209 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 INMTO95050 263 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 H1F0P07305 194 aaKnown RBP13.81□□□□□ -0.2
COL20A1-206ENST00000479501 RYKP34925 604 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 VIPR2P41587 438 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 RORCP51449 518 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 CD83Q01151 205 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL20A1-206ENST00000479501 PGBD2Q6P3X8 592 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 SYCE2Q6PIF2 218 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms