RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 LACRTQ9GZZ8 138 aa16.01■□□□□ 0.15
VIM-204ENST00000478746 KCMF1Q9P0J7 381 aa16.01■□□□□ 0.15
VIM-204ENST00000478746 KLHL42Q9P2K6 505 aa16.01■□□□□ 0.15
VIM-204ENST00000478746 ERVK-11Q9UQG0 969 aa16.01■□□□□ 0.15
VIM-204ENST00000478746 SH2B3Q9UQQ2 575 aa16.01■□□□□ 0.15
VIM-204ENST00000478746 VPS9D1Q9Y2B5 631 aa16.01■□□□□ 0.15
VIM-204ENST00000478746 A0A0G2JNJ9 132 aa16■□□□□ 0.15
VIM-204ENST00000478746 TRBV11-1A0A0K0K1C0 115 aa16■□□□□ 0.15
VIM-204ENST00000478746 TCRBV16S1A1N1A0A5B0 115 aa16■□□□□ 0.15
VIM-204ENST00000478746 OR14I1A6ND48 311 aa16■□□□□ 0.15
VIM-204ENST00000478746 FIGNL2A6NMB9 653 aa16■□□□□ 0.15
VIM-204ENST00000478746 FAM166BA8MTA8 275 aa16■□□□□ 0.15
VIM-204ENST00000478746 ACOT7O00154 380 aa16■□□□□ 0.15
VIM-204ENST00000478746 BCKDKO14874 412 aa16■□□□□ 0.15
VIM-204ENST00000478746 IPO7O95373 1038 aaKnown RBP16■□□□□ 0.15
VIM-204ENST00000478746 B3GALT4O96024 378 aa16■□□□□ 0.15
VIM-204ENST00000478746 ZSCAN5DPP0CG00 497 aa16■□□□□ 0.15
VIM-204ENST00000478746 ENO3P13929 434 aaPredicted RBP16■□□□□ 0.15
VIM-204ENST00000478746 ALOX12P18054 663 aa16■□□□□ 0.15
VIM-204ENST00000478746 MAOAP21397 527 aa16■□□□□ 0.15
VIM-204ENST00000478746 MGAT1P26572 445 aa16■□□□□ 0.15
VIM-204ENST00000478746 RPL22P35268 128 aaKnown RBP16■□□□□ 0.15
VIM-204ENST00000478746 SNX1Q13596 522 aa16■□□□□ 0.15
VIM-204ENST00000478746 SLC25A35Q3KQZ1 300 aa16■□□□□ 0.15
VIM-204ENST00000478746 NIPAL1Q6NVV3 410 aa16■□□□□ 0.15
VIM-204ENST00000478746 RGS9BPQ6ZS82 235 aa16■□□□□ 0.15
VIM-204ENST00000478746 CDC20BQ86Y33 519 aa16■□□□□ 0.15
VIM-204ENST00000478746 CILP2Q8IUL8 1156 aa16■□□□□ 0.15
VIM-204ENST00000478746 SPNS2Q8IVW8 549 aa16■□□□□ 0.15
VIM-204ENST00000478746 ACRBPQ8NEB7 543 aa16■□□□□ 0.15
VIM-204ENST00000478746 ARMC2Q8NEN0 867 aa16■□□□□ 0.15
VIM-204ENST00000478746 GIMAP7Q8NHV1 300 aa16■□□□□ 0.15
VIM-204ENST00000478746 C1orf54Q8WWF1 131 aa16■□□□□ 0.15
VIM-204ENST00000478746 ALKBH8Q96BT7 664 aaKnown RBP16■□□□□ 0.15
VIM-204ENST00000478746 SMR3AQ99954 134 aa16■□□□□ 0.15
VIM-204ENST00000478746 ZDHHC11Q9H8X9 412 aa16■□□□□ 0.15
VIM-204ENST00000478746 PRDM9Q9NQV7 894 aa16■□□□□ 0.15
VIM-204ENST00000478746 EIF2B3Q9NR50 452 aaKnown RBP16■□□□□ 0.15
VIM-204ENST00000478746 DEPPQ9NTK1 212 aa16■□□□□ 0.15
VIM-204ENST00000478746 SYBUQ9NX95 663 aa16■□□□□ 0.15
VIM-204ENST00000478746 Q9UFV3 132 aa16■□□□□ 0.15
VIM-204ENST00000478746 NDUFS4O43181 175 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 FTCDO95954 541 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 SERPIND1P05546 499 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 CDH1P12830 882 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 SSR4P51571 173 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 HYAL2Q12891 473 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 PWP1Q13610 501 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 NEPROQ6NW34 567 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 SLC22A16Q86VW1 577 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 SYCE1Q8N0S2 351 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 APCDD1LQ8NCL9 501 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 PSD4Q8NDX1 1056 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 B3GNT7Q8NFL0 401 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 OR2M7Q8NG81 312 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 SMC6Q96SB8 1091 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 ATG10Q9H0Y0 220 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 CCDC68Q9H2F9 335 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 TSPY26PQ9H489 355 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 NECTIN3Q9NQS3 549 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 INTS10Q9NVR2 710 aaKnown RBP15.99■□□□□ 0.15
VIM-204ENST00000478746 YARS2Q9Y2Z4 477 aaKnown RBP15.99■□□□□ 0.15
VIM-204ENST00000478746 DHRS7Q9Y394 339 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 FAM215AQ9Y5M1 114 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 VPS13CQ709C8 3753 aa15.99■□□□□ 0.15
VIM-204ENST00000478746 HRNRQ86YZ3 2850 aaPredicted RBP15.98■□□□□ 0.15
VIM-204ENST00000478746 CTAGE9A4FU28 777 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 PINLYPA6NC86 204 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 A8MVJ9 347 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 PSMD12O00232 456 aaPredicted RBP15.98■□□□□ 0.15
VIM-204ENST00000478746 SLC16A5O15375 505 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 OR1F1O43749 312 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 CEP104O60308 925 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 PEX19P40855 299 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 NAE1Q13564 534 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 RTL6Q6ICC9 239 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 WDR53Q7Z5U6 358 aaPredicted RBP15.98■□□□□ 0.15
VIM-204ENST00000478746 C18orf12Q96KH6 178 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 HPF1Q9NWY4 346 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 CRIM1Q9NZV1 1036 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 ZFATQ9P243 1243 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 ACAD8Q9UKU7 415 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 SOX13Q9UN79 622 aa15.98■□□□□ 0.15
VIM-204ENST00000478746 REXO2Q9Y3B8 237 aaKnown RBP15.98■□□□□ 0.15
VIM-204ENST00000478746 IGKV3D-11A0A0A0MRZ8 115 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 A6NNC1 897 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 MYO1DO94832 1006 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 ZNF888P0CJ79 500 aaPredicted RBP15.97■□□□□ 0.15
VIM-204ENST00000478746 RNH1P13489 461 aaKnown RBP15.97■□□□□ 0.15
VIM-204ENST00000478746 NPPBP16860 134 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 PAMP19021 973 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 CCND1P24385 295 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 ADSLP30566 484 aaPredicted RBP15.97■□□□□ 0.15
VIM-204ENST00000478746 ADH7P40394 386 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 CCR8P51685 355 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 BASP1P80723 227 aaKnown RBP15.97■□□□□ 0.15
VIM-204ENST00000478746 RGS1Q08116 209 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 KIAA0930Q6ICG6 404 aaPredicted RBP15.97■□□□□ 0.15
VIM-204ENST00000478746 AGTRAPQ6RW13 159 aa15.97■□□□□ 0.15
VIM-204ENST00000478746 LCTLQ6UWM7 567 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms