RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, human

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS27A-208	ENST00000478196	SUFU	Q9UMX1	484 aa		3.91	□□□□□ -1.78
RPS27A-208	ENST00000478196	CSNK1G3	Q9Y6M4	447 aa		3.91	□□□□□ -1.78
RPS27A-208	ENST00000478196	MDC1	Q14676	2089 aa	Known RBP	3.91	□□□□□ -1.78
RPS27A-208	ENST00000478196	IGSF10	Q6WRI0	2623 aa		3.91	□□□□□ -1.78
RPS27A-208	ENST00000478196	MGA	Q8IWI9	3026 aa		3.9	□□□□□ -1.78
RPS27A-208	ENST00000478196	FER1L5	A0AVI2	2057 aa		3.9	□□□□□ -1.78
RPS27A-208	ENST00000478196	GOLGA6L10	A0A0M3HER8	536 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	GLYATL1P3	A0A0U1RQE8	302 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SPAAR	A0A1B0GVQ0	90 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	GOLGA6C	A6NDK9	693 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	GOLGA6B	A6NDN3	693 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	OR51F1	A6NGY5	319 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	C2orf81	A6NN90	581 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	CCDC188	H7C350	402 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	CACNB4	O00305	520 aa	Predicted RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	DNALI1	O14645	258 aa	Predicted RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	TPP1	O14773	563 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	YKT6	O15498	198 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	FFAR2	O15552	330 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	FLRT2	O43155	660 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	AQP9	O43315	295 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	RAD51C	O43502	376 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	MTX2	O75431	263 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	BANF1	O75531	89 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SRP72	O76094	671 aa	Known RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SEC31A	O94979	1220 aa	Known RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SLC25A14	O95258	325 aa	Predicted RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	EML2	O95834	649 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	PYGL	P06737	847 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	GOLGA6D	P0CG33	693 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	MLN	P12872	115 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	CEACAM1	P13688	526 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	AK4	P27144	223 aa	Predicted RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	HTR1B	P28222	390 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	NMBR	P28336	390 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	FOXN2	P32314	431 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	ACTN2	P35609	894 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SPAM1	P38567	509 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	GRK6	P43250	576 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	RPL21	P46778	160 aa	Known RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	NPY2R	P49146	381 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	ATXN3	P54252	364 aa	Predicted RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	TERF1	P54274	439 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	KRTAP10-5	P60370	271 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	HNRNPK	P61978	463 aa	Known RBP eCLIP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	BASP1	P80723	227 aa	Known RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	PDE1B	Q01064	536 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	DR1	Q01658	176 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	C2orf54	Q08AI8	447 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	TMEM115	Q12893	351 aa	Predicted RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	DNAJC3	Q13217	504 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	NFATC2	Q13469	925 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	PTK2B	Q14289	1009 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	DEFB133	Q30KQ1	61 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	FNBP1L	Q5T0N5	605 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	GPRC6A	Q5T6X5	926 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	ZDHHC20	Q5W0Z9	365 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	DUPD1	Q68J44	220 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	HIBCH	Q6NVY1	386 aa	Predicted RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	DOK6	Q6PKX4	331 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	CES3	Q6UWW8	571 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SNX20	Q7Z614	316 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	TMEM135	Q86UB9	458 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SLC35F3	Q8IY50	421 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	FSTL5	Q8N475	847 aa	Predicted RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	EID2	Q8N6I1	236 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	RASGEF1A	Q8N9B8	481 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	NOA1	Q8NC60	698 aa	Known RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	DDHD1	Q8NEL9	900 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	OR4C6	Q8NH72	309 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	LMX1A	Q8TE12	382 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	NR4A3	Q92570	626 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	PEX13	Q92968	403 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	APOLD1	Q96LR9	279 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SERPINB12	Q96P63	405 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	PRR25	Q96S07	402 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	KRT12	Q99456	494 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	TMEM204	Q9BSN7	226 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	IL22	Q9GZX6	179 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	FAM96A	Q9H5X1	160 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	MRM3	Q9HC36	420 aa	Known RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SPATS2L	Q9NUQ6	558 aa	Known RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	GOLGA6A	Q9NYA3	693 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	NLGN3	Q9NZ94	848 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	GRHL1	Q9NZI5	618 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SELENON	Q9NZV5	590 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SPAST	Q9UBP0	616 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	KL	Q9UEF7	1012 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	APOBEC3B	Q9UH17	382 aa	Known RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SNX24	Q9Y343	169 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	PKP3	Q9Y446	797 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	PRSS21	Q9Y6M0	314 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	ATRX	P46100	2492 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	TLN1	Q9Y490	2541 aa	Known RBP	3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	CCDC88C	Q9P219	2028 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	NBEA	Q8NFP9	2946 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	PIEZO2	Q9H5I5	2752 aa		3.9	□□□□□ -1.79
RPS27A-208	ENST00000478196	SDK2	Q58EX2	2172 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms