RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 HTR1AP08908 422 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 TPD52P55327 224 aaPredicted RBP11.7□□□□□ -0.54
PTPRF-212ENST00000477970 CDK3Q00526 305 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 SF1Q15637 639 aaKnown RBP11.7□□□□□ -0.54
PTPRF-212ENST00000477970 CRB2Q5IJ48 1285 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 TMIGD1Q6UXZ0 262 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 SLC9B2Q86UD5 537 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 GPR156Q8NFN8 814 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 OR4K1Q8NGD4 311 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 HLA-CQ95604 372 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 FAM131CQ96AQ9 280 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 RSPH9Q9H1X1 276 aaPredicted RBP11.7□□□□□ -0.54
PTPRF-212ENST00000477970 GPATCH2Q9NW75 528 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 FAF1Q9UNN5 650 aaPredicted RBP11.7□□□□□ -0.54
PTPRF-212ENST00000477970 PCMT1P22061 227 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 YAP1P46937 504 aaKnown RBP11.7□□□□□ -0.54
PTPRF-212ENST00000477970 CSNK2BP67870 215 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 HBA1P69905 142 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 HPCAP84074 193 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 REEP5Q00765 189 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 TEKQ02763 1124 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 CNTN1Q12860 1018 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 DCTN2Q13561 401 aaKnown RBP11.7□□□□□ -0.54
PTPRF-212ENST00000477970 MEP1AQ16819 746 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 ZNF630Q2M218 657 aaPredicted RBP11.7□□□□□ -0.54
PTPRF-212ENST00000477970 GCNT6Q5T4J0 391 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 TSPYL5Q86VY4 417 aaPredicted RBP11.7□□□□□ -0.54
PTPRF-212ENST00000477970 CROCCP3Q8IVE0 287 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 ZFYVE19Q96K21 471 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 APOL4Q9BPW4 351 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 DPH2Q9BQC3 489 aaPredicted RBP11.7□□□□□ -0.54
PTPRF-212ENST00000477970 EPS8L2Q9H6S3 715 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 FANCEQ9HB96 536 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 C1GALT1Q9NS00 363 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 TAS2R9Q9NYW1 312 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 CIDEBQ9UHD4 219 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 ADAM29Q9UKF5 820 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 PCDHGB3Q9Y5G1 929 aa11.7□□□□□ -0.54
PTPRF-212ENST00000477970 KMOO15229 486 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 KCNJ13O60928 360 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 NOL3O60936 208 aaKnown RBP11.69□□□□□ -0.54
PTPRF-212ENST00000477970 KRT75O95678 551 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 ADH1BP00325 375 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 IL7RP16871 459 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 PRKACGP22612 351 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 DRD3P35462 400 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 CLK3P49761 638 aaKnown RBP11.69□□□□□ -0.54
PTPRF-212ENST00000477970 RUNX3Q13761 415 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 MPEG1Q2M385 716 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 TRIM40Q6P9F5 258 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 MMAAQ8IVH4 418 aaKnown RBP11.69□□□□□ -0.54
PTPRF-212ENST00000477970 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTPRF-212ENST00000477970 PLA2G15Q8NCC3 412 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 WDR48Q8TAF3 677 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 SPNS1Q9H2V7 528 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 UBE2ZQ9H832 354 aaPredicted RBP11.69□□□□□ -0.54
PTPRF-212ENST00000477970 SH3BP4Q9P0V3 963 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 ACSL5Q9ULC5 683 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 FRKP42685 505 aaPredicted RBP11.69□□□□□ -0.54
PTPRF-212ENST00000477970 C16orf72Q14CZ0 275 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTPRF-212ENST00000477970 AGBL4Q5VU57 503 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 ANKRD34AQ69YU3 496 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 CRTC3Q6UUV7 619 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 VITQ6UXI7 678 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 TMC5Q6UXY8 1006 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 VTCN1Q7Z7D3 282 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 HEATR4Q86WZ0 1026 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 NAGSQ8N159 534 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 C12orf76Q8N812 135 aaPredicted RBP11.69□□□□□ -0.54
PTPRF-212ENST00000477970 CDC26Q8NHZ8 85 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 SLC35A5Q9BS91 424 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 ADNPQ9H2P0 1102 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 DUSP21Q9H596 190 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 ASF1AQ9Y294 204 aa11.69□□□□□ -0.54
PTPRF-212ENST00000477970 PRRC2BQ5JSZ5 2229 aaKnown RBP11.69□□□□□ -0.54
PTPRF-212ENST00000477970 ADAMDEC1O15204 470 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 ATE1O95260 518 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 IFNA14P01570 189 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 EEF1B2P24534 225 aaKnown RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 GJA4P35212 333 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 TRIM23P36406 574 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 PCBP3P57721 371 aaKnown RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 C2orf80Q0P641 193 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 CAMK2GQ13555 558 aaPredicted RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 GPR107Q5VW38 600 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 KIAA1614Q5VZ46 1190 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 TFGQ92734 400 aaPredicted RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 QRFPRQ96P65 431 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 AIF1LQ9BQI0 150 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 ZNF717Q9BY31 904 aaPredicted RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 THUMPD1Q9NXG2 353 aaKnown RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 SAMHD1Q9Y3Z3 626 aaKnown RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 PCYT1BQ9Y5K3 369 aaPredicted RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 CACNB4O00305 520 aaPredicted RBP11.68□□□□□ -0.54
PTPRF-212ENST00000477970 PLK4O00444 970 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 TGFB1P01137 390 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 NUDT7P0C024 238 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 ARAFP10398 606 aa11.68□□□□□ -0.54
PTPRF-212ENST00000477970 UQCRC2P22695 453 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms