RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 PLA2G3Q9NZ20 509 aa13□□□□□ -0.33
HDAC7-222ENST00000477937 STMN3Q9NZ72 180 aa13□□□□□ -0.33
HDAC7-222ENST00000477937 MTRF1LQ9UGC7 380 aaKnown RBP13□□□□□ -0.33
HDAC7-222ENST00000477937 ZGRF1Q86YA3 2104 aa13□□□□□ -0.33
HDAC7-222ENST00000477937 FLNCQ14315 2725 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 FLNBO75369 2602 aaKnown RBP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 TRAV17A0A0B4J275 112 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 A8MUI8 341 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 PSMD12O00232 456 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 CCNT2O60583 730 aaKnown RBP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 PRMT3O60678 531 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 B4GALT2O60909 372 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 DNAJB6O75190 326 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 LTA4HP09960 611 aaKnown RBP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 RNH1P13489 461 aaKnown RBP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 HPDP32754 393 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 KCNC1P48547 511 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 OR4D2P58180 307 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 ZNF33BQ06732 778 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 PDK4Q16654 411 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 SFT2D3Q587I9 215 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 XKR6Q5GH73 641 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 RPUSD3Q6P087 351 aaKnown RBP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 PAPD4Q6PIY7 484 aaKnown RBP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 CCDC91Q7Z6B0 441 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 ISCA2Q86U28 154 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 M1APQ8TC57 530 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 CCT6BQ92526 530 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 ESAMQ96AP7 390 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 MRRFQ96E11 262 aaKnown RBP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 PTCD3Q96EY7 689 aaKnown RBP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 FAR2Q96K12 515 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 MAGEB10Q96LZ2 347 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 PTCHD1Q96NR3 888 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 LPAR4Q99677 370 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 CD244Q9BZW8 370 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.99□□□□□ -0.33
HDAC7-222ENST00000477937 ALG9Q9H6U8 611 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 COPG2Q9UBF2 871 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 NTNG1Q9Y2I2 539 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 ACOT9Q9Y305 439 aa12.99□□□□□ -0.33
HDAC7-222ENST00000477937 A0A087X1B8 175 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 A0A088AWK7 358 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 LRIT2A6NDA9 550 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 ANKUB1A6NFN9 424 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 SUPT3HB4E1H0 165 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 SUPT3HO75486 399 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 CLEC3AO75596 197 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 WDPCPO95876 746 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 MYBL2P10244 700 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 ZNF10P21506 573 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-222ENST00000477937 GMPRP36959 345 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 TNFSF10P50591 281 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 BTN3A2P78410 334 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 DLG1Q12959 904 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 LAPTM5Q13571 262 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 UAP1Q16222 522 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-222ENST00000477937 HIST2H2ACQ16777 129 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-222ENST00000477937 FAM83EQ2M2I3 478 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 GLE1Q53GS7 698 aaKnown RBP12.98□□□□□ -0.33
HDAC7-222ENST00000477937 MROH9Q5TGP6 573 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 HIST2H2AA3Q6FI13 130 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 H3F3CQ6NXT2 135 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 FAM180AQ6UWF9 173 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 QSOX2Q6ZRP7 698 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 AMER2Q8N7J2 671 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 SUN3Q8TAQ9 357 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 GRHL3Q8TE85 626 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 FAR1Q8WVX9 515 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 TSLPQ969D9 159 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 GAL3ST3Q96A11 431 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 ZNF354BQ96LW1 612 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 EFCAB11Q9BUY7 163 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 AICDAQ9GZX7 198 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 RNF32Q9H0A6 362 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 RHBGQ9H310 441 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 KCNK13Q9HB14 408 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 MMP25Q9NPA2 562 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 NUDT4Q9NZJ9 180 aa12.98□□□□□ -0.33
HDAC7-222ENST00000477937 DMGDHQ9UI17 866 aaKnown RBP12.98□□□□□ -0.33
HDAC7-222ENST00000477937 SETXQ7Z333 2677 aaKnown RBP12.98□□□□□ -0.33
HDAC7-222ENST00000477937 COL12A1Q99715 3063 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 SVILO95425 2214 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 SYCE1LA8MT33 242 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 C4orf51C9J302 202 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 KIF2AO00139 706 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-222ENST00000477937 ERI3O43414 337 aaKnown RBP12.97□□□□□ -0.33
HDAC7-222ENST00000477937 PRAMEF4O60810 478 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 KERAO60938 352 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 F10P00742 488 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 C2P06681 752 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 CTAGE8P0CG41 777 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 HNRNPH1P31943 449 aaKnown RBP12.97□□□□□ -0.33
HDAC7-222ENST00000477937 BTG2P78543 158 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 IRF8Q02556 426 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 DOC2AQ14183 400 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 PAGE2BQ5JRK9 111 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 PRAMEF9Q5VWM5 478 aa12.97□□□□□ -0.33
HDAC7-222ENST00000477937 LRRC70Q7Z2Q7 622 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms