RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 KRT7P08729 469 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 CISD3P0C7P0 127 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 MBL2P11226 248 aaPredicted RBP4.35□□□□□ -1.71
VPS50-214ENST00000477935 CYP2F1P24903 491 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 CD82P27701 267 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 KRT9P35527 623 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 BSGP35613 385 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 NUDT1P36639 197 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 MAGEA11P43364 429 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 ISL1P61371 349 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 CEBPZQ03701 1054 aaKnown RBP4.35□□□□□ -1.71
VPS50-214ENST00000477935 CSTF3Q12996 717 aaKnown RBP4.35□□□□□ -1.71
VPS50-214ENST00000477935 RBBP5Q15291 538 aaKnown RBP4.35□□□□□ -1.71
VPS50-214ENST00000477935 TTC31Q49AM3 519 aaPredicted RBP4.35□□□□□ -1.71
VPS50-214ENST00000477935 CDONQ4KMG0 1287 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 GFI1BQ5VTD9 330 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 SPATA1Q5VX52 437 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 SPNS3Q6ZMD2 512 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 C4orf50Q6ZRC1 276 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 DENND5BQ6ZUT9 1274 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 RSRC2Q7L4I2 434 aaKnown RBP4.35□□□□□ -1.71
VPS50-214ENST00000477935 TEX19Q8NA77 164 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 OR5R1Q8NH85 324 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 PIGTQ969N2 578 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 ATXN7L3BQ96GX2 97 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 HES6Q96HZ4 224 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 QRFPRQ96P65 431 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 BBS2Q9BXC9 721 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 MMP28Q9H239 520 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 ABCF3Q9NUQ8 709 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 LRWD1Q9UFC0 647 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 ACSL5Q9ULC5 683 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 ENTPD4Q9Y227 616 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 OR2W1Q9Y3N9 320 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 MED13LQ71F56 2210 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 ARID2Q68CP9 1835 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 ZNF638Q14966 1978 aaKnown RBP4.34□□□□□ -1.71
VPS50-214ENST00000477935 A0A1W2PNU3 283 aaPredicted RBP4.34□□□□□ -1.71
VPS50-214ENST00000477935 C1orf226A1L170 272 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 NEDD8-MDP1E9PL57 170 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 SLC37A4O43826 429 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 TMEM63AO94886 807 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 ADRB2P07550 413 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 ANXA13P27216 316 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 TAF6P49848 677 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 MLLT10P55197 1068 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 TAS2R38P59533 333 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 NOP14P78316 857 aaKnown RBP4.34□□□□□ -1.71
VPS50-214ENST00000477935 PDIA5Q14554 519 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 TGIF1Q15583 401 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 MAPRE1Q15691 268 aaKnown RBP4.34□□□□□ -1.71
VPS50-214ENST00000477935 DECR1Q16698 335 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 ACCSLQ4AC99 568 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 LACTB2Q53H82 288 aaPredicted RBP4.34□□□□□ -1.71
VPS50-214ENST00000477935 DCST1Q5T197 706 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 SDHAF4Q5VUM1 108 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 WSCD1Q658N2 575 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 ASB18Q6ZVZ8 466 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 DCUN1D3Q8IWE4 304 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 BBS7Q8IWZ6 715 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 BLIDQ8IZY5 108 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 TMEM86AQ8N2M4 240 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 SLC25A45Q8N413 288 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 FBXO39Q8N4B4 442 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 PAF1Q8N7H5 531 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 ACVR1CQ8NER5 493 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 NR4A3Q92570 626 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 TAAR8Q969N4 342 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 TMEM159Q96B96 161 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 HDAC11Q96DB2 347 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 MPP4Q96JB8 637 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 UHRF2Q96PU4 802 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 TRIM9Q9C026 710 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 ZNF71Q9NQZ8 489 aaPredicted RBP4.34□□□□□ -1.71
VPS50-214ENST00000477935 ZFP57Q9NU63 452 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 ELOVL2Q9NXB9 296 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 NLGN3Q9NZ94 848 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 FBXL2Q9UKC9 423 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 PLA2G4CQ9UP65 541 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 KLHL20Q9Y2M5 609 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 ADAM18Q9Y3Q7 739 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 MAU2Q9Y6X3 613 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 ESPL1Q14674 2120 aa4.34□□□□□ -1.71
VPS50-214ENST00000477935 HIVEP3Q5T1R4 2406 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 ANK1P16157 1881 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 ARHGEF35A5YM69 484 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 FAM172BPA6NC97 362 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 CCDC169A6NNP5 214 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 KPNA7A9QM74 516 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 M0QZ24 198 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 P2RY10O00398 339 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 SCAMP1O15126 338 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 EPB41L2O43491 1005 aaKnown RBP4.33□□□□□ -1.72
VPS50-214ENST00000477935 IPO7O95373 1038 aaKnown RBP4.33□□□□□ -1.72
VPS50-214ENST00000477935 MLYCDO95822 493 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 PLGP00747 810 aaPredicted RBP4.33□□□□□ -1.72
VPS50-214ENST00000477935 ATP1A1P05023 1023 aaKnown RBP4.33□□□□□ -1.72
VPS50-214ENST00000477935 MUTP22033 750 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 UBA7P41226 1012 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 APOBEC1P41238 236 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms