RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 KANK2Q63ZY3 851 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 KCNT2Q6UVM3 1135 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 KIAA1324Q6UXG2 1013 aaKnown RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 C15orf39Q6ZRI6 1047 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 CEP68Q76N32 757 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 EIF3MQ7L2H7 374 aaKnown RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 HSD17B13Q7Z5P4 300 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 OR8H3Q8N146 312 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 KRT78Q8N1N4 520 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 MIER2Q8N344 545 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 C9orf62Q8N4C0 152 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 DPP10Q8N608 796 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 DNAJC5GQ8N7S2 189 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 C12orf29Q8N999 325 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 FAM83FQ8NEG4 500 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 REPS2Q8NFH8 660 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 OR1M1Q8NGA1 313 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 OR52H1Q8NGJ2 320 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 OR52N1Q8NH53 320 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 ITFG1Q8TB96 612 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 ELP5Q8TE02 316 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 NSUN6Q8TEA1 469 aaKnown RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF431Q8TF32 576 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 SOCS4Q8WXH5 440 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 AP3S1Q92572 193 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 ATOH1Q92858 354 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 HGDQ93099 445 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 FBXW5Q969U6 566 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 RAD51AP1Q96B01 352 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 COA7Q96BR5 231 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 PAWRQ96IZ0 340 aaKnown RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 KLHL15Q96M94 604 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 CCDC115Q96NT0 180 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 COL21A1Q96P44 957 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 ERMAPQ96PL5 475 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 LMF1Q96S06 567 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 TMEM209Q96SK2 561 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 C11orf70Q9BRQ4 267 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 MARVELD1Q9BSK0 173 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 C1QTNF1Q9BXJ1 281 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 QRSL1Q9H0R6 528 aaKnown RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 GABARAPL1Q9H0R8 117 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 RNPEPQ9H4A4 650 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 SEC61A2Q9H9S3 476 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 NMUR1Q9HB89 426 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 SLC35C2Q9NQQ7 365 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 TLR9Q9NR96 1032 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 ABCC13Q9NSE7 274 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 RNF146Q9NTX7 359 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 DPP3Q9NY33 737 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 COA4Q9NYJ1 87 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 RDH8Q9NYR8 311 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 RBAKQ9NYW8 714 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 MPP6Q9NZW5 540 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 COL20A1Q9P218 1284 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 NUFIP1Q9UHK0 495 aaKnown RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 CPA4Q9UI42 421 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 TMEFF2Q9UIK5 374 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 LEF1Q9UJU2 399 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 AGO1Q9UL18 857 aaKnown RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 TBC1D24Q9ULP9 559 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 MRPS7Q9Y2R9 242 aaKnown RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 ACOT9Q9Y305 439 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 MFHAS1Q9Y4C4 1052 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 MAGED1Q9Y5V3 778 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 CROCCQ5TZA2 2017 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 A0A1W2PP18 115 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 A0A1W2PQH9 124 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 E2F8A0AVK6 867 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 A8MXK9 166 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 MCIDASD6RGH6 385 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 PTGES3LE9PB15 166 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 K7ENM7 598 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 UPK1AO00322 258 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SULT1C2O00338 296 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 NEMP1O14524 444 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 GNGT2O14610 69 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 PRMT5O14744 637 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 BCKDKO14874 412 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SCN2BO60939 215 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SEC22BO75396 215 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ERN1O75460 977 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CNMDO75829 334 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 IPO13O94829 963 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SCELO95171 688 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CCNDBP1O95273 360 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 PGLSO95336 258 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CLIC3O95833 236 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 DHFRP00374 187 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 LTA4HP09960 611 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ANXA3P12429 323 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 DARSP14868 501 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 HOXB8P17481 243 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 HK1P19367 917 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 RAB4AP20338 218 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 GPX3P22352 226 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 KCNA5P22460 613 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SLC6A2P23975 617 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 GTF2E2P29084 291 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CALCRP30988 508 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms