RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 POLR2J2Q9GZM3 115 aaKnown RBP10.61□□□□□ -0.71
COL27A1-204ENST00000477421 DCSTAMPQ9H295 470 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 TM9SF3Q9HD45 589 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 SNTG1Q9NSN8 517 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 SPATA7Q9P0W8 599 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 PTGFRNQ9P2B2 879 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 MALT1Q9UDY8 824 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 CD300AQ9UGN4 299 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 UTS2RQ9UKP6 389 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 NINQ8N4C6 2090 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 CBFA2T3O75081 653 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 TSC22D2O75157 780 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 CR2P20023 1033 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 PSMA1P25786 263 aaKnown RBP10.61□□□□□ -0.71
COL27A1-204ENST00000477421 HLCSP50747 726 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 TXNL4AP83876 142 aaKnown RBP10.61□□□□□ -0.71
COL27A1-204ENST00000477421 MLLT1Q03111 559 aaPredicted RBP10.61□□□□□ -0.71
COL27A1-204ENST00000477421 SMN1Q16637 294 aaKnown RBP10.61□□□□□ -0.71
COL27A1-204ENST00000477421 SNAP47Q5SQN1 464 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 TRIQKQ629K1 86 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 LHX8Q68G74 356 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 ANKRD34AQ69YU3 496 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 POMZP3Q6PJE2 187 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 CACTIN-AS1Q8N1I8 211 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 METTL25Q8N6Q8 603 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 OR2A12Q8NGT7 310 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 DNASE1L2Q92874 299 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 ALPK1Q96QP1 1244 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 RAD9AQ99638 391 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 KXD1Q9BQD3 176 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 LHPPQ9H008 270 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 POLE4Q9NR33 117 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 HEBP1Q9NRV9 189 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 TAS2R9Q9NYW1 312 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 INTS6Q9UL03 887 aaKnown RBP10.61□□□□□ -0.71
COL27A1-204ENST00000477421 NDRG2Q9UN36 371 aaKnown RBP10.61□□□□□ -0.71
COL27A1-204ENST00000477421 TMEM202A6NGA9 273 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 FXYD1O00168 92 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 TAPBPO15533 448 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 TCEAL5Q5H9L2 206 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 Q6ZPB1 254 aaPredicted RBP10.61□□□□□ -0.71
COL27A1-204ENST00000477421 USP30Q70CQ3 517 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 HTR3DQ70Z44 454 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 WFIKKN2Q8TEU8 576 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 ASB11Q8WXH4 323 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 SMPDL3AQ92484 453 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 FUNDC2Q9BWH2 189 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 SRMSQ9H3Y6 488 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 KCNK12Q9HB15 430 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 CNOT11Q9UKZ1 510 aaKnown RBP10.61□□□□□ -0.71
COL27A1-204ENST00000477421 SSR3Q9UNL2 185 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 PCDHB11Q9Y5F2 797 aa10.61□□□□□ -0.71
COL27A1-204ENST00000477421 EDDM13A0A1B0GTR0 161 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 SLC1A7O00341 560 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 CD9P21926 228 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 PNLIPRP1P54315 467 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 SP140Q13342 867 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 DDI2Q5TDH0 399 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 TBPL2Q6SJ96 375 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 ERN2Q76MJ5 926 aaKnown RBP10.6□□□□□ -0.71
COL27A1-204ENST00000477421 GALNT7Q86SF2 657 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 PRSS58Q8IYP2 241 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 DPP10Q8N608 796 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 RNF31Q96EP0 1072 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 TBX5Q99593 518 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 RSPH9Q9H1X1 276 aaPredicted RBP10.6□□□□□ -0.71
COL27A1-204ENST00000477421 HEPACAM2A8MVW5 462 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 H0YAE9 185 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 ARHGEF9O43307 516 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 TLX2O43763 284 aaPredicted RBP10.6□□□□□ -0.71
COL27A1-204ENST00000477421 LAMP2P13473 410 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 RPS3P23396 243 aaKnown RBP eCLIP10.6□□□□□ -0.71
COL27A1-204ENST00000477421 AOAHP28039 575 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 RPL4P36578 427 aaKnown RBP10.6□□□□□ -0.71
COL27A1-204ENST00000477421 MLLT10P55197 1068 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 CSNK2BP67870 215 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 GPR68Q15743 365 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 NHSL2Q5HYW2 709 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 LIPIQ6XZB0 460 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 ZNF554Q86TJ5 538 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 OXR1Q8N573 874 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 RASGEF1AQ8N9B8 481 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 ENKURQ8TC29 256 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 CAPSLQ8WWF8 208 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 S100ZQ8WXG8 99 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 SLC38A4Q969I6 547 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 TADA1Q96BN2 335 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 WDR12Q9GZL7 423 aaKnown RBP10.6□□□□□ -0.71
COL27A1-204ENST00000477421 RETREG1Q9H6L5 497 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 TBC1D17Q9HA65 648 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 GSTK1Q9Y2Q3 226 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 N6AMT1Q9Y5N5 214 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 IGLV3-27P01718 113 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 C1SP09871 688 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 CKMT1AP12532 417 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 TALDO1P37837 337 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 BLVRAP53004 296 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 NCS1P62166 190 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 MRPL28Q13084 256 aaKnown RBP10.6□□□□□ -0.71
COL27A1-204ENST00000477421 ELAVL3Q14576 367 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms