RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 ARRDC3Q96B67 414 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 ANKRD36BP1Q96IX9 119 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 PIWIL1Q96J94 861 aaKnown RBP3.64□□□□□ -1.83
RPL39-203ENST00000477403 CCDC114Q96M63 670 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 DGAT2Q96PD7 388 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 ACCSQ96QU6 501 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 CCNL2Q96S94 520 aaPredicted RBP3.64□□□□□ -1.83
RPL39-203ENST00000477403 SLX1AQ9BQ83 275 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.64□□□□□ -1.832e-39■□□□□ 8.3
RPL39-203ENST00000477403 SF3B5Q9BWJ5 86 aaKnown RBP3.64□□□□□ -1.83
RPL39-203ENST00000477403 TRIM9Q9C026 710 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 C1orf21Q9H246 121 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 TMEM245Q9H330 911 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 DMAP1Q9NPF5 467 aaPredicted RBP3.64□□□□□ -1.83
RPL39-203ENST00000477403 ASCL3Q9NQ33 180 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 SIRT3Q9NTG7 399 aaPredicted RBP3.64□□□□□ -1.83
RPL39-203ENST00000477403 CHCHD3Q9NX63 227 aaKnown RBP3.64□□□□□ -1.83
RPL39-203ENST00000477403 RBAKQ9NYW8 714 aaPredicted RBP3.64□□□□□ -1.83
RPL39-203ENST00000477403 SIX4Q9UIU6 781 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 LIPT1Q9Y234 373 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 OSGIN2Q9Y236 505 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 SLCO1B1Q9Y6L6 691 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 CAPN7Q9Y6W3 813 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 PTPRJQ12913 1337 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 PLXND1Q9Y4D7 1925 aa3.64□□□□□ -1.83
RPL39-203ENST00000477403 DOPEY1Q5JWR5 2465 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 MYO18AQ92614 2054 aaKnown RBP3.63□□□□□ -1.83
RPL39-203ENST00000477403 SYNJ2BP-COX16A0A087WUM0 186 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 TEX13CA0A0J9YWL9 993 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 A0A1W2PR77 199 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 TRBC2A0A5B9 178 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 ZNF233A6NK53 670 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 PP2D1A8MPX8 630 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 CDRT15L2A8MXV6 281 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 C10orf142B7Z368 130 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 MDM4O15151 490 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 PAGE4O60829 102 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 DIAPH2O60879 1101 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 RNASEH1O60930 286 aaKnown RBP3.63□□□□□ -1.83
RPL39-203ENST00000477403 NEURL1O76050 574 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 RECQL5O94762 991 aaPredicted RBP3.63□□□□□ -1.83
RPL39-203ENST00000477403 SMC2O95347 1197 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 GCNT3O95395 438 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 PNPP00491 289 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 TNNC2P02585 160 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 IGHV4-34P06331 123 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 ABCB1P08183 1280 aaPredicted RBP3.63□□□□□ -1.83
RPL39-203ENST00000477403 IRF1P10914 325 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 RPS2P15880 293 aaKnown RBP3.63□□□□□ -1.83
RPL39-203ENST00000477403 TNFRSF8P28908 595 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 TKTL1P51854 596 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 PMS2P54278 862 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 GALCP54803 685 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 CLDN6P56747 220 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 EFNB1P98172 346 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 IL9RQ01113 521 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 RPA4Q13156 261 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 ALCAMQ13740 583 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 PTK6Q13882 451 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 SNTB1Q13884 538 aaKnown RBP3.63□□□□□ -1.83
RPL39-203ENST00000477403 TUBB2AQ13885 445 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 IL17AQ16552 155 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 MEP1BQ16820 701 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 KBTBD12Q3ZCT8 623 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 ALG10Q5BKT4 473 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 NHSL2Q5HYW2 709 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 ALG10BQ5I7T1 473 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 ENTPD8Q5MY95 495 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 WASHC2DQ5SRD0 308 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 ZNF776Q68DI1 518 aaPredicted RBP3.63□□□□□ -1.83
RPL39-203ENST00000477403 KIAA0930Q6ICG6 404 aaPredicted RBP3.63□□□□□ -1.83
RPL39-203ENST00000477403 KDELC1Q6UW63 502 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 KDM7AQ6ZMT4 941 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 MDGA2Q7Z553 956 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 ZER1Q7Z7L7 766 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 GPBP1Q86WP2 473 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 CPXM2Q8N436 756 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 ARL14Q8N4G2 192 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 ZNF557Q8N988 423 aaPredicted RBP3.63□□□□□ -1.83
RPL39-203ENST00000477403 TC2NQ8N9U0 490 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 KDM1BQ8NB78 822 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 WFIKKN2Q8TEU8 576 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 CLEC4CQ8WTT0 213 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 WBP2Q969T9 261 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 FAM149B1Q96BN6 582 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 TMCO6Q96DC7 493 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 ERLEC1Q96DZ1 483 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 SGF29Q96ES7 293 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 SAT2Q96F10 170 aaPredicted RBP3.63□□□□□ -1.83
RPL39-203ENST00000477403 SMARCD1Q96GM5 515 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 PGAM5Q96HS1 289 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 C1orf74Q96LT6 269 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 KLHL15Q96M94 604 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 SRSF8Q9BRL6 282 aaKnown RBP3.63□□□□□ -1.83
RPL39-203ENST00000477403 FAM213AQ9BRX8 229 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 SPXQ9BT56 116 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 TUBB2BQ9BVA1 445 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 STRA6Q9BX79 667 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 UBXN6Q9BZV1 441 aa3.63□□□□□ -1.83
RPL39-203ENST00000477403 CTDSP1Q9GZU7 261 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms