RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	CCDC185	Q8N715	623 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	AMER3	Q8N944	861 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	MAPK1IP1L	Q8NDC0	245 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	OR7G3	Q8NG95	312 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	GDAP1	Q8TB36	358 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	SAP25	Q8TEE9	199 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	CKAP2	Q8WWK9	683 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	GTF3A	Q92664	365 aa	Known RBP	3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	ATP6V1E2	Q96A05	226 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	PRICKLE1	Q96MT3	831 aa	Predicted RBP	3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	DESI2	Q9BSY9	194 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	LRRC61	Q9BV99	259 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	SRD5A3	Q9H8P0	318 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	NDE1	Q9NXR1	346 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	PAK5	Q9P286	719 aa		3.55	□□□□□ -1.84
RBM39-231	ENST00000477334	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	3.54	□□□□□ -1.84
RBM39-231	ENST00000477334		A0A0U1RQK1	487 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	ZNF320	A2RRD8	509 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334		K7EQD1	137 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	TFEC	O14948	347 aa	Predicted RBP	3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	SCO2	O43819	266 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	GH1	P01241	217 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	RPLP0	P05388	317 aa	Known RBP	3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	MYOG	P15173	224 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	GPR183	P32249	361 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	ST8SIA6	P61647	398 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	FKBP1B	P68106	108 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	RPP38	P78345	283 aa	Known RBP	3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	AKAP17A	Q02040	695 aa	Known RBP	3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	ZNF177	Q13360	481 aa	Predicted RBP	3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	ENPP2	Q13822	863 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	GRB14	Q14449	540 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	NHLRC1	Q6VVB1	395 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	GDPGP1	Q6ZNW5	385 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	C17orf107	Q6ZR85	190 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	SYCP3	Q8IZU3	236 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	TEKT1	Q969V4	418 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	C17orf62	Q9BQA9	187 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	PAPOLG	Q9BWT3	736 aa	Known RBP	3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	IDI2	Q9BXS1	227 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	RSPH9	Q9H1X1	276 aa	Predicted RBP	3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	MTIF3	Q9H2K0	278 aa	Known RBP	3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	CUEDC2	Q9H467	287 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	TMEM161A	Q9NX61	479 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	NLGN3	Q9NZ94	848 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	DBF4	Q9UBU7	674 aa	Predicted RBP	3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	FBXL5	Q9UKA1	691 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	TMED7	Q9Y3B3	224 aa		3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	TDRD15	B5MCY1	1934 aa	Known RBP	3.54	□□□□□ -1.84
RBM39-231	ENST00000477334	PFAS	O15067	1338 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	RNF123	Q5XPI4	1314 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	SDR42E2	A6NKP2	422 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	ZNF732	B4DXR9	585 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334		H0YIG0	161 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	SLC33A1	O00400	549 aa	Predicted RBP	3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	SIGLEC5	O15389	551 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	SLC16A8	O95907	504 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	SELE	P16581	610 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	MUT	P22033	750 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	TCF7	P36402	384 aa	Predicted RBP	3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	FEN1	P39748	380 aa	Known RBP	3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	FRK	P42685	505 aa	Predicted RBP	3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	SLC1A3	P43003	542 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	IER3	P46695	156 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	ELAVL2	Q12926	359 aa	Known RBP	3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	MAPK11	Q15759	364 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	TYSND1	Q2T9J0	566 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	SLC27A4	Q6P1M0	643 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	C11orf88	Q6PI97	169 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	SIGLEC15	Q6ZMC9	328 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	LINC00696	Q6ZRV3	163 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334		Q71RC1	249 aa	Predicted RBP	3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	PIWIL3	Q7Z3Z3	882 aa	Known RBP	3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	DND1	Q8IYX4	353 aa	Known RBP	3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	PRSS33	Q8NF86	280 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	OR9Q2	Q8NGE9	314 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	OR52B6	Q8NGF0	335 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	OR10G7	Q8NGN6	311 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	FIBIN	Q8TAL6	211 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	CD99L2	Q8TCZ2	262 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	RFT1	Q96AA3	541 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	LURAP1	Q96LR2	239 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	ATOH8	Q96SQ7	321 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	PCDHB18P	Q96TA0	734 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	RBM4B	Q9BQ04	359 aa	Known RBP	3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	ZNF559	Q9BR84	538 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	GPATCH1	Q9BRR8	931 aa	Known RBP	3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	MUTYH	Q9UIF7	546 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	MOB4	Q9Y3A3	225 aa		3.53	□□□□□ -1.84
RBM39-231	ENST00000477334	ACE	P12821	1306 aa		3.52	□□□□□ -1.85
RBM39-231	ENST00000477334	C2orf92	A0A1B0GVN3	265 aa		3.52	□□□□□ -1.85
RBM39-231	ENST00000477334	FAM170A	A1A519	330 aa		3.52	□□□□□ -1.85
RBM39-231	ENST00000477334	CCDC162P	A2VCL2	907 aa		3.52	□□□□□ -1.85
RBM39-231	ENST00000477334	NKX6-3	A6NJ46	265 aa		3.52	□□□□□ -1.85
RBM39-231	ENST00000477334	ASB14	A6NK59	587 aa		3.52	□□□□□ -1.85
RBM39-231	ENST00000477334	CRLF1	O75462	422 aa		3.52	□□□□□ -1.85
RBM39-231	ENST00000477334	CRCP	O75575	148 aa		3.52	□□□□□ -1.85
RBM39-231	ENST00000477334	RAD51D	O75771	328 aa		3.52	□□□□□ -1.85
RBM39-231	ENST00000477334	NXPH4	O95158	308 aa		3.52	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms