RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 RSPH9Q9H1X1 276 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 EHD1Q9H4M9 534 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 TPT1P8Q9HAU6 139 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 POU2F3Q9UKI9 436 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 NDRG2Q9UN36 371 aaKnown RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 SEC16AO15027 2179 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 SH3BP5O60239 455 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 CNOT3O75175 753 aaKnown RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 NME6O75414 186 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 ERN1O75460 977 aaKnown RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 ACSL1P33121 698 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 MERTKQ12866 999 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 CLCA4Q14CN2 919 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 INAQ16352 499 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 PRSS53Q2L4Q9 553 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 TTC33Q6PID6 262 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 VASH1Q7L8A9 365 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 PDZD3Q86UT5 571 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 C17orf64Q86WR6 236 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 UHRF1Q96T88 793 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 BDH2Q9BUT1 245 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 DMRT3Q9NQL9 472 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 FZD4Q9ULV1 537 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 SNX11Q9Y5W9 270 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 ABCA7Q8IZY2 2146 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 ANKDD1BA6NHY2 528 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 AP1G1O43747 822 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 VEGFDO43915 354 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 HS6ST1O60243 411 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 IL3P08700 152 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 RAP2AP10114 183 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 ETFAP13804 333 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 TIA1P31483 386 aaKnown RBP eCLIP12.83□□□□□ -0.364e-10■■■■■ 30
HDAC7-221ENST00000477203 KIR2DL1P43626 348 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-221ENST00000477203 CSTF3Q12996 717 aaKnown RBP12.83□□□□□ -0.36
HDAC7-221ENST00000477203 TRIM16LQ309B1 348 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 ZNF658BQ4V348 819 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-221ENST00000477203 GPR107Q5VW38 600 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 ZNF776Q68DI1 518 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-221ENST00000477203 SDE2Q6IQ49 451 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 METTL2BQ6P1Q9 378 aaKnown RBP12.83□□□□□ -0.36
HDAC7-221ENST00000477203 NAGSQ8N159 534 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 AMER3Q8N944 861 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 EXO1Q9UQ84 846 aaKnown RBP12.83□□□□□ -0.36
HDAC7-221ENST00000477203 SCAMP2O15127 329 aaKnown RBP12.83□□□□□ -0.36
HDAC7-221ENST00000477203 NARSO43776 548 aaKnown RBP12.83□□□□□ -0.36
HDAC7-221ENST00000477203 DEAF1O75398 565 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-221ENST00000477203 CTHP32929 405 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 TPD52P55327 224 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-221ENST00000477203 HBA1P69905 142 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 FGD3Q5JSP0 725 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 SFTPA2Q8IWL1 248 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 SIPA1Q96FS4 1042 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 ZNF514Q96K75 400 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-221ENST00000477203 FCRL4Q96PJ5 515 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 HAUS8Q9BT25 410 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 FGF22Q9HCT0 170 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 ZNF451Q9Y4E5 1061 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 PIAS3Q9Y6X2 628 aa12.83□□□□□ -0.36
HDAC7-221ENST00000477203 ATE1O95260 518 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 EML2O95834 649 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 NPPAP01160 153 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 C5AR1P21730 350 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 EEF1B2P24534 225 aaKnown RBP12.82□□□□□ -0.36
HDAC7-221ENST00000477203 NTSR1P30989 418 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 MRPL19P49406 292 aaKnown RBP12.82□□□□□ -0.36
HDAC7-221ENST00000477203 MLF2Q15773 248 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-221ENST00000477203 ATP6AP1Q15904 470 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 TMTC4Q5T4D3 741 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 ENPP7Q6UWV6 458 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 GPR141Q7Z602 305 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 DCUN1D3Q8IWE4 304 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 DHRSXQ8N5I4 330 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 ANKRD53Q8N9V6 530 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 LINC01555Q8NAE3 123 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 TMEM145Q8NBT3 493 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 HMGB4Q8WW32 186 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 TAMM41Q96BW9 452 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 ISOC1Q96CN7 298 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 COX14Q96I36 57 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 SH3GL1Q99961 368 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 ZNF696Q9H7X3 374 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 MIEF1Q9NQG6 463 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 PHPT1Q9NRX4 125 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-221ENST00000477203 ITGB1BP2Q9UKP3 347 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 ABCG2Q9UNQ0 655 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 TRBV5-3A0A0A0MS03 114 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 G3V2T6 193 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 LCMT2O60294 686 aaKnown RBP12.82□□□□□ -0.36
HDAC7-221ENST00000477203 MITFO75030 526 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-221ENST00000477203 IDSP22304 550 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 KELP23276 732 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 S100A1P23297 94 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 ELK4P28324 431 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 IGFALSP35858 605 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 OR1E2P47887 323 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 APOFQ13790 326 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 KCNJ8Q15842 424 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 PAGE2BQ5JRK9 111 aa12.82□□□□□ -0.36
HDAC7-221ENST00000477203 DEFB119Q8N690 84 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms