RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TAPBPO15533 448 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 CCNT2O60583 730 aaKnown RBP15.28■□□□□ 0.04
COL1A1-205ENST00000476387 C2P06681 752 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 ZNF888P0CJ79 500 aaPredicted RBP15.28■□□□□ 0.04
COL1A1-205ENST00000476387 C8orf89P0DMQ9 161 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 ICAM2P13598 275 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 TYK2P29597 1187 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 DLG1Q12959 904 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 PDK4Q16654 411 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 DEFB134Q4QY38 66 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 FBXO48Q5FWF7 155 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 UBAP2Q5T6F2 1119 aaKnown RBP15.28■□□□□ 0.04
COL1A1-205ENST00000476387 TMIGD1Q6UXZ0 262 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 SLCO4C1Q6ZQN7 724 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 LRRC70Q7Z2Q7 622 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 MAMDC2Q7Z304 686 aaPredicted RBP15.28■□□□□ 0.04
COL1A1-205ENST00000476387 ISCA2Q86U28 154 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 PDSS2Q86YH6 399 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 ANKRD53Q8N9V6 530 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 KCTD4Q8WVF5 259 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 FAR1Q8WVX9 515 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 SLC44A1Q8WWI5 657 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 CCT6BQ92526 530 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 PSMF1Q92530 271 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 NXNL1Q96CM4 212 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 PAFAH2Q99487 392 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 FUT8Q9BYC5 575 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 ZNF700Q9H0M5 742 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 IGSF5Q9NSI5 407 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 C19orf25Q9UFG5 118 aaPredicted RBP15.28■□□□□ 0.04
COL1A1-205ENST00000476387 PTBP2Q9UKA9 531 aaKnown RBP15.28■□□□□ 0.04
COL1A1-205ENST00000476387 NFU1Q9UMS0 254 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 A0A087WUV0 522 aaPredicted RBP15.27■□□□□ 0.04
COL1A1-205ENST00000476387 A0A096LPK6 155 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 CCDC189A1A4V9 331 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 UBXN8O00124 270 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 E2F3O00716 465 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 GALR3O60755 368 aaPredicted RBP15.27■□□□□ 0.04
COL1A1-205ENST00000476387 JRKO75564 520 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 UQCRHP07919 91 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 SERPINA6P08185 405 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 RHOXF2BP0C7M4 288 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 EDN3P14138 238 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 GSTM2P28161 218 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 SERPINB9P50453 376 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 ARG2P78540 354 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 IRF9Q00978 393 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 PCOLCEQ15113 449 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 INAQ16352 499 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 XKR6Q5GH73 641 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 TOR1AIP1Q5JTV8 583 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 FAM180AQ6UWF9 173 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.27■□□□□ 0.04
COL1A1-205ENST00000476387 CENPLQ8N0S6 344 aaPredicted RBP15.27■□□□□ 0.04
COL1A1-205ENST00000476387 AFAP1L2Q8N4X5 818 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 BRIX1Q8TDN6 353 aaKnown RBP15.27■□□□□ 0.04
COL1A1-205ENST00000476387 HAS2Q92819 552 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 ESAMQ96AP7 390 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 PEX11GQ96HA9 241 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 ATOH8Q96SQ7 321 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 RHOXF2Q9BQY4 288 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 RBCK1Q9BYM8 510 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 SLC6A16Q9GZN6 736 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 PITHD1Q9GZP4 211 aaPredicted RBP15.27■□□□□ 0.04
COL1A1-205ENST00000476387 VN1R1Q9GZP7 353 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 EHD1Q9H4M9 534 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 PRM3Q9NNZ6 103 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 PTGFRNQ9P2B2 879 aa15.27■□□□□ 0.04
COL1A1-205ENST00000476387 CPAMD8Q8IZJ3 1885 aa15.27■□□□□ 0.03
COL1A1-205ENST00000476387 TRAV17A0A0B4J275 112 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 HMX2A2RU54 273 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 ANKDD1BA6NHY2 528 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 POC1B-GALNT4F8VUJ3 575 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 KRT38O76015 456 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 WFS1O76024 890 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 KLHL2O95198 593 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 IL10P22301 178 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 HPDP32754 393 aaPredicted RBP15.26■□□□□ 0.03
COL1A1-205ENST00000476387 HNF4AP41235 474 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 MSH2P43246 934 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 TNFSF10P50591 281 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 STXBP1P61764 594 aaKnown RBP15.26■□□□□ 0.03
COL1A1-205ENST00000476387 HIST2H2BCQ6DN03 193 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 BCORP1Q8N888 145 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 CATSPER1Q8NEC5 780 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 RHEBL1Q8TAI7 183 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 UHMK1Q8TAS1 419 aaKnown RBP15.26■□□□□ 0.03
COL1A1-205ENST00000476387 UTP15Q8TED0 518 aaKnown RBP15.26■□□□□ 0.03
COL1A1-205ENST00000476387 UBTD2Q8WUN7 234 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 PTCD3Q96EY7 689 aaKnown RBP15.26■□□□□ 0.03
COL1A1-205ENST00000476387 SEC16BQ96JE7 1060 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 OR1F2PQ96R84 312 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 SLX1AQ9BQ83 275 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 TUBB6Q9BUF5 446 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 EFCAB11Q9BUY7 163 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 CD244Q9BZW8 370 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 RNF32Q9H0A6 362 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 VPS11Q9H270 941 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 NT5DC2Q9H857 520 aa15.26■□□□□ 0.03
COL1A1-205ENST00000476387 OPTCQ9UBM4 332 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms