RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SOX11P35716 441 aa19.94■□□□□ 0.78
LIME1-204ENST00000476183 MAGEA12P43365 314 aa19.94■□□□□ 0.78
LIME1-204ENST00000476183 FAM83EQ2M2I3 478 aa19.94■□□□□ 0.78
LIME1-204ENST00000476183 LINC00696Q6ZRV3 163 aa19.94■□□□□ 0.78
LIME1-204ENST00000476183 LRRC70Q7Z2Q7 622 aa19.94■□□□□ 0.78
LIME1-204ENST00000476183 CPEB2Q7Z5Q1 589 aaKnown RBP19.94■□□□□ 0.78
LIME1-204ENST00000476183 CUZD1Q86UP6 607 aa19.94■□□□□ 0.78
LIME1-204ENST00000476183 PLPP5Q8NEB5 264 aa19.94■□□□□ 0.78
LIME1-204ENST00000476183 TTLQ8NG68 377 aa19.94■□□□□ 0.78
LIME1-204ENST00000476183 RHEBL1Q8TAI7 183 aa19.94■□□□□ 0.78
LIME1-204ENST00000476183 TBC1D20Q96BZ9 403 aa19.94■□□□□ 0.78
LIME1-204ENST00000476183 PTCD3Q96EY7 689 aaKnown RBP19.94■□□□□ 0.78
LIME1-204ENST00000476183 PITHD1Q9GZP4 211 aaPredicted RBP19.94■□□□□ 0.78
LIME1-204ENST00000476183 A0A0G2JN53 185 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 LRIT2A6NDA9 550 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 INHBAP08476 426 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 ITGAMP11215 1152 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 SKP1P63208 163 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 CHIT1Q13231 466 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 MFAP5Q13361 173 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 E2F2Q14209 437 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 NIPAL1Q6NVV3 410 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 ISLR2Q6UXK2 745 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 PLD6Q8N2A8 252 aaKnown RBP19.93■□□□□ 0.78
LIME1-204ENST00000476183 SIRT6Q8N6T7 355 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 PPP4R1Q8TF05 950 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 CCT6BQ92526 530 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 ISL2Q96A47 359 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 MS4A6EQ96DS6 147 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 TUBB6Q9BUF5 446 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 VPS11Q9H270 941 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 ZNF358Q9NW07 568 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 PTGFRNQ9P2B2 879 aa19.93■□□□□ 0.78
LIME1-204ENST00000476183 USP9XQ93008 2570 aaPredicted RBP19.92■□□□□ 0.78
LIME1-204ENST00000476183 K7EPI3 171 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 B4GALT2O60909 372 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 CLEC3AO75596 197 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 RHOXF2BP0C7M4 288 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 GSTM2P28161 218 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 CASP2P42575 452 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 STXBP1P61764 594 aaKnown RBP19.92■□□□□ 0.78
LIME1-204ENST00000476183 BTN3A2P78410 334 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 IRF8Q02556 426 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 ABRAXAS2Q15018 415 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 ACAP2Q15057 778 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 TBCCQ15814 346 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 CRB2Q5IJ48 1285 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 RIPOR1Q6ZS17 1223 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 IFT20Q8IY31 132 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 CA13Q8N1Q1 262 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 EFCAB3Q8N7B9 438 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 DCAKDQ8WVC6 231 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 GAL3ST3Q96A11 431 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 C19orf60Q96EN9 201 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 SEC16BQ96JE7 1060 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 LMF1Q96S06 567 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 RHOXF2Q9BQY4 288 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 EFCAB11Q9BUY7 163 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 ILKAPQ9H0C8 392 aaPredicted RBP19.92■□□□□ 0.78
LIME1-204ENST00000476183 RHBGQ9H310 441 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 C19orf25Q9UFG5 118 aaPredicted RBP19.92■□□□□ 0.78
LIME1-204ENST00000476183 PCDHGA10Q9Y5H3 936 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 PTPN13Q12923 2485 aa19.92■□□□□ 0.78
LIME1-204ENST00000476183 HECTD1Q9ULT8 2610 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 CPAMD8Q8IZJ3 1885 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 LRRC14BA6NHZ5 514 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 SYCE1LA8MT33 242 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 FAM227AF5H4B4 570 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 POC1B-GALNT4F8VUJ3 575 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 ERI3O43414 337 aaKnown RBP19.91■□□□□ 0.78
LIME1-204ENST00000476183 WFS1O76024 890 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 UQCRFS1P47985 274 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 SERPINB9P50453 376 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 BTG2P78543 158 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 NSDHLQ15738 373 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 PFKFB4Q16877 469 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 ADPRMQ3LIE5 342 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 B3GNTL1Q67FW5 361 aaPredicted RBP19.91■□□□□ 0.78
LIME1-204ENST00000476183 DNAJB14Q8TBM8 379 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 SNRNP40Q96DI7 357 aaKnown RBP19.91■□□□□ 0.78
LIME1-204ENST00000476183 QRFPRQ96P65 431 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 EPS8L2Q9H6S3 715 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 CLK4Q9HAZ1 481 aaKnown RBP19.91■□□□□ 0.78
LIME1-204ENST00000476183 OPTCQ9UBM4 332 aa19.91■□□□□ 0.78
LIME1-204ENST00000476183 A0A087WUV0 522 aaPredicted RBP19.9■□□□□ 0.78
LIME1-204ENST00000476183 CCDC189A1A4V9 331 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 ANKDD1BA6NHY2 528 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 MAGEB17A8MXT2 336 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 KLK8O60259 260 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 FAM153BP0C7A2 387 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 MSH2P43246 934 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 PCDH1Q08174 1060 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 RUNX2Q13950 521 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 SETDB1Q15047 1291 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 FAM153CQ494X1 144 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 SFT2D3Q587I9 215 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 TECRLQ5HYJ1 363 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 PLAG1Q6DJT9 500 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 ATCAYQ86WG3 371 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 IQCKQ8N0W5 287 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms