RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SLC23A1Q9UHI7 598 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 KCTD3Q9Y597 815 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 AP4B1Q9Y6B7 739 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 ARFGEF1Q9Y6D6 1849 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 OR2AT4A6NND4 320 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 A8MXK9 166 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 SURF4O15260 269 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 WIPF1O43516 503 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 SRPX2O60687 465 aaPredicted RBP4.69□□□□□ -1.66
NPHP3-206ENST00000474871 H6PDO95479 791 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 FGF19O95750 216 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 SUPT20HL2P0C7V6 817 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 SAGP10523 405 aaPredicted RBP4.69□□□□□ -1.66
NPHP3-206ENST00000474871 NQO2P16083 231 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 UCP1P25874 307 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 OPRL1P41146 370 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 ALDH3B1P43353 468 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 GNA12Q03113 381 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 TNK2Q07912 1038 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 C2orf76Q3KRA6 126 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 OGFRL1Q5TC84 451 aaPredicted RBP4.69□□□□□ -1.66
NPHP3-206ENST00000474871 TCTN3Q6NUS6 607 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 FRA10AC1Q70Z53 315 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 PPIL6Q8IXY8 311 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 UBQLNLQ8IYU4 475 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 ABHD11Q8NFV4 315 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 FBXO32Q969P5 355 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 TSPAN17Q96FV3 270 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF559Q9BR84 538 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 LRFN3Q9BTN0 628 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 METTL8Q9H825 291 aaKnown RBP4.69□□□□□ -1.66
NPHP3-206ENST00000474871 ELP3Q9H9T3 547 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 GRHL1Q9NZI5 618 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 PURGQ9UJV8 347 aaKnown RBP4.69□□□□□ -1.66
NPHP3-206ENST00000474871 POLIQ9UNA4 740 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 WASF3Q9UPY6 502 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 LTBP3Q9NS15 1303 aa4.69□□□□□ -1.66
NPHP3-206ENST00000474871 C2orf92A0A1B0GVN3 265 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 MEIOCA2RUB1 952 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 FAM74A7A6NL05 159 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 IFITM10A6NMD0 228 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 YDJCA8MPS7 323 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 NEMP1O14524 444 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 SNAP91O60641 907 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 ATP1A1P05023 1023 aaKnown RBP4.68□□□□□ -1.66
NPHP3-206ENST00000474871 MELTFP08582 738 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 DRD5P21918 477 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 THPOP40225 353 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 IRF8Q02556 426 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 BNIP3Q12983 259 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 ITGADQ13349 1161 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF568Q3ZCX4 644 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 DUSP28Q4G0W2 176 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 FAM74A3Q4VXF1 159 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 UBXN11Q5T124 520 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 KYAT3Q6YP21 454 aaKnown RBP4.68□□□□□ -1.66
NPHP3-206ENST00000474871 PRR23BQ6ZRT6 265 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF551Q7Z340 670 aaPredicted RBP4.68□□□□□ -1.66
NPHP3-206ENST00000474871 ZBTB34Q8NCN2 500 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 BHLHE23Q8NDY6 225 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 AGBL3Q8NEM8 1001 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 OR6M1Q8NGM8 313 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 GPKOWQ92917 476 aaPredicted RBP eCLIP4.68□□□□□ -1.66
NPHP3-206ENST00000474871 GCDHQ92947 438 aaPredicted RBP4.68□□□□□ -1.66
NPHP3-206ENST00000474871 APIPQ96GX9 242 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 PANX3Q96QZ0 392 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 PANX1Q96RD7 426 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF347Q96SE7 839 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 CITED2Q99967 270 aaPredicted RBP4.68□□□□□ -1.66
NPHP3-206ENST00000474871 FAM110AQ9BQ89 295 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 EFHD1Q9BUP0 239 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 TMED9Q9BVK6 235 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 KLHL1Q9NR64 748 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 DUSP22Q9NRW4 184 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 GTSE1Q9NYZ3 720 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 IFNKQ9P0W0 207 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 ANAPC7Q9UJX3 599 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 USP3Q9Y6I4 520 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 NCANO14594 1321 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 A0A0U1RQF3 1178 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 URADA6NGE7 173 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 GLTPD2A6NH11 291 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 C1QTNF3-AMACRE9PGA6 284 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 TBC1D4O60343 1298 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 HUS1O60921 280 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 NDUFS3O75489 264 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 CYBBP04839 570 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 HNRNPA1P09651 372 aaKnown RBP eCLIP4.68□□□□□ -1.66
NPHP3-206ENST00000474871 ARL4AP40617 200 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 XKP51811 444 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 MYL7Q01449 175 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 TLE2Q04725 743 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 ILF3Q12906 894 aaKnown RBP eCLIP4.68□□□□□ -1.66
NPHP3-206ENST00000474871 MTM1Q13496 603 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 KRT33BQ14525 404 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 KARSQ15046 597 aaKnown RBP4.68□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF628Q5EBL2 1059 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 CCNYL2Q5T2Q4 361 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 ATG16L1Q676U5 607 aa4.68□□□□□ -1.66
NPHP3-206ENST00000474871 GPAT2Q6NUI2 795 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms