RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 RASSF1Q9NS23 344 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 ABCF3Q9NUQ8 709 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 SH2B3Q9UQQ2 575 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 PLEKHA6Q9Y2H5 1048 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 NAALAD2Q9Y3Q0 740 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 SLC22A7Q9Y694 548 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 DUSP10Q9Y6W6 482 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 SVEP1Q4LDE5 3571 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 SCN3AQ9NY46 2000 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 HIVEP2P31629 2446 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 IGKV3D-11A0A0A0MRZ8 115 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 A0A0G2JMM0 328 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 A0A0G2JNJ9 132 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 A0A1W2PPB8 328 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 A0A1W2PRS3 328 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 FEZF1A0PJY2 475 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 GRID2IPA4D2P6 1211 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 BTNL10A8MVZ5 291 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 KIR3DP1A8MWS1 328 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 GOLGA8KD6RF30 607 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 E7EVH7 732 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 NPIPA2E9PIF3 369 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 NPIPA3F8WFD2 350 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 GOLGA8TH3BQL2 631 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 GFYI3L273 518 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 FCHO1O14526 889 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 LIASO43766 372 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 LCMT2O60294 686 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 DNAJB6O75190 326 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 VAPBO95292 243 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 SYF2O95926 243 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 IFNB1P01574 187 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 PTMAP06454 111 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 SLC35G6P0C7Q6 338 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 GLI4P10075 376 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 ETS1P14921 441 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 CHRM3P20309 590 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 JAK1P23458 1154 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 DNASE1P24855 282 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 HRH2P25021 359 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 ACVR2AP27037 513 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 NMBRP28336 390 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 STIP1P31948 543 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 ADH7P40394 386 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 SKIV2L2P42285 1042 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 CLCN7P51798 805 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 SESN2P58004 480 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 TBPL1P62380 186 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 PPIAP62937 165 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 CUL1Q13616 776 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 HERC3Q15034 1050 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 SPA17Q15506 151 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 SKOR2Q2VWA4 1001 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 GXYLT1Q4G148 440 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 MEI1Q5TIA1 1274 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 RTL6Q6ICC9 239 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 CAPN13Q6MZZ7 669 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 MRNIPQ6NTE8 343 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 ARSKQ6UWY0 536 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 PAMR1Q6UXH9 720 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 QSOX2Q6ZRP7 698 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 Q71RC1 249 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 PRUNE1Q86TP1 453 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 ASPGQ86U10 573 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 SLC26A11Q86WA9 606 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 CDC20BQ86Y33 519 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 LIX1LQ8IVB5 337 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 ZZZ3Q8IYH5 903 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 CCDC170Q8IYT3 715 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 TMEM151AQ8N4L1 468 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 SVOPQ8N4V2 548 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 OTUD6BQ8N6M0 293 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 TC2NQ8N9U0 490 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 APCDD1LQ8NCL9 501 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 ZNF740Q8NDX6 193 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 NFAM1Q8NET5 270 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 WFDC11Q8NEX6 87 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 OR5M9Q8NGP3 310 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 CREB3L4Q8TEY5 395 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 SLC13A3Q8WWT9 602 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 ASB11Q8WXH4 323 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 MRRFQ96E11 262 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 MFSD3Q96ES6 412 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 PWWP2AQ96N64 755 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 PANX2Q96RD6 677 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 TCF12Q99081 682 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 TTYH2Q9BSA4 534 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 IL22Q9GZX6 179 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 DEFB127Q9H1M4 99 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 ZDHHC11Q9H8X9 412 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 CCDC177Q9NQR7 707 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 PNPLA3Q9NST1 481 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 DEPPQ9NTK1 212 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 TMEM184CQ9NVA4 438 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 CRIM1Q9NZV1 1036 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 Q9UFV3 132 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 CRYL1Q9Y2S2 319 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 MED16Q9Y2X0 877 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 FAM215AQ9Y5M1 114 aa4.78□□□□□ -1.64
SNRNP40-204ENST00000474025 TRBV11-1A0A0K0K1C0 115 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms