RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 PTHP01270 115 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 GSTM1P09488 218 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TACR1P25103 407 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 HLA-FP30511 346 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TIA1P31483 386 aaKnown RBP eCLIP5.88□□□□□ -1.476e-6■■□□□ 11.4
HERC4-209ENST00000473533 SDC2P34741 201 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CRATP43155 626 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 NR4A2P43354 598 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 GSTM5P46439 218 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 WNT3P56703 355 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 IFITM2Q01629 132 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 C6orf183Q5T699 404 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 LAIR1Q6GTX8 287 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 MZT2AQ6P582 158 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TRAF7Q6Q0C0 670 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 NOXA1Q86UR1 476 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CLIP4Q8N3C7 705 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 KLHDC9Q8NEP7 349 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 OR8J1Q8NGP2 316 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CDC26Q8NHZ8 85 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TRMT2BQ96GJ1 504 aaKnown RBP5.88□□□□□ -1.47
HERC4-209ENST00000473533 FRMD6Q96NE9 622 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 MED18Q9BUE0 208 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TEX12Q9BXU0 123 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 REEP4Q9H6H4 257 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ING3Q9NXR8 418 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ZNF226Q9NYT6 803 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 STMN3Q9NZ72 180 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 EVLQ9UI08 416 aaPredicted RBP5.88□□□□□ -1.47
HERC4-209ENST00000473533 CPA4Q9UI42 421 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 NOX1Q9Y5S8 564 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TRPM7Q96QT4 1865 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 GNG14A0A1W2PPG7 69 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 C1orf226A1L170 272 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 HYKKA2RU49 373 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CARNS1A5YM72 827 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 MANSC4A6NHS7 340 aaPredicted RBP5.88□□□□□ -1.47
HERC4-209ENST00000473533 TLR4O00206 839 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 FAAHO00519 579 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 IGHA2P01877 340 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 PRKAR1AP10644 381 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CYP2A6P11509 494 aaPredicted RBP5.88□□□□□ -1.47
HERC4-209ENST00000473533 OSMP13725 252 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ZNF30P17039 623 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CHMP24386 653 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CHI3L1P36222 383 aaPredicted RBP5.88□□□□□ -1.47
HERC4-209ENST00000473533 BMPR1AP36894 532 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 PPP3R1P63098 170 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 PSPHP78330 225 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CDK6Q00534 326 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ZNF763Q0D2J5 394 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 SPHARQ15513 63 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TAF1CQ15572 869 aaPredicted RBP5.88□□□□□ -1.47
HERC4-209ENST00000473533 AAK1Q2M2I8 961 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 EXOC3L2Q2M3D2 409 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 KIAA1211LQ6NV74 962 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 FUT10Q6P4F1 479 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ANGPTL8Q6UXH0 198 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ZNF280BQ86YH2 543 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 LIX1LQ8IVB5 337 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 FAM181AQ8N9Y4 354 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 C19orf18Q8NEA5 215 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 LKAAEAR1Q8TD35 194 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 SH3KBP1Q96B97 665 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 OR2A14Q96R47 310 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 FAM129BQ96TA1 746 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TCF25Q9BQ70 676 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CENPOQ9BU64 300 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 EFCAB11Q9BUY7 163 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 BOCQ9BWV1 1114 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TAPBPLQ9BX59 468 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 UCK2Q9BZX2 261 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ANKRA2Q9H9E1 313 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 SGK2Q9HBY8 427 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 RPRD1BQ9NQG5 326 aaKnown RBP5.88□□□□□ -1.47
HERC4-209ENST00000473533 FBXL12Q9NXK8 326 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 AHSPQ9NZD4 102 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TBC1D14Q9P2M4 693 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 LRFN2Q9ULH4 789 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 KLHL20Q9Y2M5 609 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 PRSS21Q9Y6M0 314 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 MEIOCA2RUB1 952 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 KRT87PA6NCN2 255 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 NOTOA8MTQ0 251 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 GAPDHSO14556 408 aaPredicted RBP5.88□□□□□ -1.47
HERC4-209ENST00000473533 ARHGAP33O14559 1287 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 SEPT4O43236 478 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 COCHO43405 550 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ALPIP09923 528 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 NR2F6P10588 404 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CKMT1AP12532 417 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ATP1B2P14415 290 aaPredicted RBP5.88□□□□□ -1.47
HERC4-209ENST00000473533 MYL12AP19105 171 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CBLP22681 906 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ITGB7P26010 798 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CST5P28325 142 aaPredicted RBP5.88□□□□□ -1.47
HERC4-209ENST00000473533 HNF1BP35680 557 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 XCR1P46094 333 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 INPP1P49441 399 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ANXA11P50995 505 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms