RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ZNF283Q8N7M2 679 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SYT17Q9BSW7 474 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PCDHAC1Q9H158 963 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SMURF2Q9HAU4 748 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CEP170BQ9Y4F5 1589 aaPredicted RBP12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ZNF541Q9H0D2 1346 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 A0A1B0GVI7 797 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SIX3O95343 332 aaPredicted RBP12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LATS1O95835 1130 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IFNA10P01566 189 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ABHD2P08910 425 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SOX2P48431 317 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CRTC1Q6UUV9 634 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 UNQ6126/PRO20091Q6UXV3 157 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 THAP6Q8TBB0 222 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FBXW11Q9UKB1 542 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PCTPQ9UKL6 214 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ZC3H13Q5T200 1668 aaKnown RBP12.83□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NACAE9PAV3 2078 aa12.83□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CEMIPQ8WUJ3 1361 aa12.83□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TCRBV21S2A2A0A5A6 115 aa12.83□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CLIC1O00299 241 aa12.83□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MATN1P21941 496 aa12.83□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TSFMP43897 325 aaKnown RBP12.83□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DSTNP60981 165 aa12.83□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 QPCTQ16769 361 aa12.83□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TFGQ92734 400 aaPredicted RBP12.83□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PCDHGB1Q9Y5G3 927 aa12.83□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PCYT1BQ9Y5K3 369 aaPredicted RBP12.83□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LAMTOR5O43504 91 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CFHP08603 1231 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GDF5P43026 501 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 EIF5AP63241 154 aaKnown RBP12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RAB11FIP5Q9BXF6 653 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ARFGEF3Q5TH69 2177 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 E9PI62 339 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SDC3O75056 442 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC2A2P11168 524 aaPredicted RBP12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CCND3P30281 292 aaPredicted RBP12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FAM69BQ5VUD6 431 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PIM3Q86V86 326 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CLDN19Q8N6F1 224 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 C1orf52Q8N6N3 182 aaKnown RBP12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF347Q96SE7 839 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RCOR3Q9P2K3 495 aaPredicted RBP12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 USP31Q70CQ4 1352 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ALOX15BO15296 676 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TGDSO95455 350 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RPLP0P05388 317 aaKnown RBP12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OR2B6P58173 313 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 VMACQ2NL98 169 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 DSC3Q14574 896 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TBRG1Q3YBR2 411 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF776Q68DI1 518 aaPredicted RBP12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RHCGQ9UBD6 479 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ABCG2Q9UNQ0 655 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 REXO2Q9Y3B8 237 aaKnown RBP12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SHROOM3Q8TF72 1996 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ESR1P03372 595 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 C4BPAP04003 597 aaKnown RBP12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ADH7P40394 386 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PRKCIP41743 596 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC9A3P48764 834 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RTP1P59025 263 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 MEF2AQ02078 507 aaPredicted RBP12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 KIAA0319Q5VV43 1072 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OR10G2Q8NGC3 310 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 NDNFQ8TB73 568 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 DGCR14Q96DF8 476 aaKnown RBP12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FLRT1Q9NZU1 646 aa12.83□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 INTS1Q8N201 2190 aaKnown RBP12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 COQ9O75208 318 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 AHSA1O95433 338 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CREB1P16220 341 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 DGKQP52824 942 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 IRF5Q13568 498 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ANKRD22Q5VYY1 191 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FAM83HQ6ZRV2 1179 aaPredicted RBP12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 AQP11Q8NBQ7 271 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC13A3Q8WWT9 602 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 BSCL2Q96G97 398 aaPredicted RBP12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF180Q9UJW8 692 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PRPS2P11908 318 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RALGPS1Q5JS13 557 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 C6orf183Q5T699 404 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 MARCH9Q86YJ5 346 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CELF5Q8N6W0 485 aaKnown RBP12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC6A7Q99884 636 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CDKN2BP42772 138 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 LEPRP48357 1165 aaKnown RBP12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF81P51508 661 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ARL16Q0P5N6 197 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 IRF2BP2Q7Z5L9 587 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ELMOD2Q8IZ81 293 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OR56B2PQ8NGI1 322 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GPR174Q9BXC1 333 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CYP3A7-CYP3A51PA0A087WV96 503 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PRORSD1PA6NEY8 169 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CYP3A7P24462 503 aa12.82□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GLP1RP43220 463 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms