RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SERTAD3Q9UJW9 196 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 CLCA2Q9UQC9 943 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 DLGAP4Q9Y2H0 992 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 CEP250Q9BV73 2442 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 A0A1W2PNU3 283 aaPredicted RBP18.24■□□□□ 0.51
PSPC1-203ENST00000471658 DCDC2BA2VCK2 349 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 ZSCAN9O15535 394 aaPredicted RBP18.24■□□□□ 0.51
PSPC1-203ENST00000471658 DNAJB6O75190 326 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 TIAF1O95411 115 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 BTN3A2P78410 334 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 EMX2Q04743 252 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 IL23RQ5VWK5 629 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 OR4C11Q6IEV9 310 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 NOXRED1Q6NXP6 359 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 OR8K5Q8NH50 307 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 GAL3ST3Q96A11 431 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 DEPDC7Q96QD5 511 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 ARL2BPQ9Y2Y0 163 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 LOXL2Q9Y4K0 774 aa18.24■□□□□ 0.51
PSPC1-203ENST00000471658 HYKKA2RU49 373 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 FITM1A5D6W6 292 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 FAM149AA5PLN7 773 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 TXNDC9O14530 226 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 SEMA3DO95025 777 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 CDK4P11802 303 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 IL1RNP18510 177 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 ITIH1P19827 911 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 NCF2P19878 526 aaPredicted RBP18.23■□□□□ 0.51
PSPC1-203ENST00000471658 ETV5P41161 510 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 ERVK-8P63133 956 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 DEFB134Q4QY38 66 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 MANEAQ5SRI9 462 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 TRIM40Q6P9F5 258 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 PDSS2Q86YH6 399 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 STON2Q8WXE9 905 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 PMEPA1Q969W9 287 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 QRFPRQ96P65 431 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 STRADBQ9C0K7 418 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 FANCEQ9HB96 536 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 DLL3Q9NYJ7 618 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 BAIAP2L1Q9UHR4 511 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 RARRES3Q9UL19 164 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 CFAP54Q96N23 3096 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 UBDO15205 165 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 ZNF749O43361 778 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 BCKDHAP12694 445 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 ALOX12P18054 663 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 TACR1P25103 407 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 TPP2P29144 1249 aaPredicted RBP18.23■□□□□ 0.51
PSPC1-203ENST00000471658 SSR2P43308 183 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 NME5P56597 212 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 MC2RQ01718 297 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 TARDBPQ13148 414 aaKnown RBP eCLIP18.23■□□□□ 0.515e-7■■■■■ 35.8
PSPC1-203ENST00000471658 GRM7Q14831 915 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 SPIN4Q56A73 249 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 OGFOD2Q6N063 350 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 PWWP2BQ6NUJ5 590 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 RAB11FIP2Q7L804 512 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 GPR135Q8IZ08 494 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 CCDC197Q8NCU1 140 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 FCRL1Q96LA6 429 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 CMKLR1Q99788 373 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 CENPKQ9BS16 269 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 AHSPQ9NZD4 102 aa18.23■□□□□ 0.51
PSPC1-203ENST00000471658 KIF26BQ2KJY2 2108 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 A0A0A6YYC8 382 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-203ENST00000471658 URADA6NGE7 173 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 ZNF860A6NHJ4 632 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 I3L1I5 382 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-203ENST00000471658 FOXS1O43638 330 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 PCDH7O60245 1069 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 ATXN8OSP0DMR3 200 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 G6PDP11413 515 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 ATP5A1P25705 553 aaKnown RBP18.22■□□□□ 0.51
PSPC1-203ENST00000471658 CERS1P27544 350 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 GCGRP47871 477 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 ABHD13Q7L211 337 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 SPATA19Q7Z5L4 167 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 MTDHQ86UE4 582 aaKnown RBP18.22■□□□□ 0.51
PSPC1-203ENST00000471658 LIX1Q8N485 282 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 METTL27Q8N6F8 245 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-203ENST00000471658 TTC29Q8NA56 475 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-203ENST00000471658 OR9A4Q8NGU2 314 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 CLHC1Q8NHS4 586 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 NUDT8Q8WV74 236 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 EGLN2Q96KS0 407 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 KCNC2Q96PR1 638 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 TBCDQ9BTW9 1192 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 ENAMQ9NRM1 1142 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 CUTCQ9NTM9 273 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 DHCR7Q9UBM7 475 aaKnown RBP18.22■□□□□ 0.51
PSPC1-203ENST00000471658 NAALAD2Q9Y3Q0 740 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 SLC22A7Q9Y694 548 aa18.22■□□□□ 0.51
PSPC1-203ENST00000471658 SCN3AQ9NY46 2000 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 TMX2-CTNND1H3BSU7 103 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 SGK494L7N484 410 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 TMPRSS11DO60235 418 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 ANXA4P09525 319 aaPredicted RBP18.21■□□□□ 0.51
PSPC1-203ENST00000471658 CD1EP15812 388 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 SDC1P18827 310 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms